WormBase Tree Display for Gene: WBGene00022021
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| WBGene00022021 | SMap | S_parent | Sequence | Y61A9LA | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y61A9LA.10 | |||||||
| Molecular_name | Y61A9LA.10 | ||||||||
| Y61A9LA.10.1 | |||||||||
| CE42325 | |||||||||
| Other_name | Y61A9LA.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y61A9LA.b | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y61A9LA.10 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y61A9LA.10 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (151) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP5536 | ||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00006497 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable GTP binding activity; GTPase activity; and U3 snoRNA binding activity. Predicted to be involved in endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus. Predicted to be part of 90S preribosome. Expressed in head. Human ortholog(s) of this gene implicated in nonsyndromic aplasia cutis congenita. Is an ortholog of human BMS1 (BMS1 ribosome biogenesis factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080661 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23505) | ||||
| Molecular_info | Corresponding_CDS | Y61A9LA.10 | |||||||
| Corresponding_CDS_history | Y61A9LA.10:wp188 | ||||||||
| Corresponding_transcript | Y61A9LA.10.1 | ||||||||
| Other_sequence (98) | |||||||||
| Associated_feature | WBsf668908 | ||||||||
| WBsf668909 | |||||||||
| WBsf233594 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr7085 | ||||||||
| Expr1011451 | |||||||||
| Expr1039676 | |||||||||
| Expr1161262 | |||||||||
| Expr2008124 | |||||||||
| Expr2026363 | |||||||||
| Drives_construct | WBCnstr00003700 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction (107) | |||||||||
| Map_info | Positive | Positive_clone | Y61A9LA | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -4.93958 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
