WormBase Tree Display for Gene: WBGene00022018
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WBGene00022018 | SMap | S_parent | Sequence | Y61A9LA | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y61A9LA.7 | |||||||
Molecular_name | Y61A9LA.7a | ||||||||
Y61A9LA.7a.1 | |||||||||
CE50378 | |||||||||
Y61A9LA.7b | |||||||||
CE50435 | |||||||||
Y61A9LA.7b.1 | |||||||||
Other_name | Y61A9LA.f | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y61A9LA.7 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | Y61A9LA.7 | ||||||||
DB_info | Database | AceView | gene | 5F38 | |||||
WormQTL | gene | WBGene00022018 | |||||||
WormFlux | gene | WBGene00022018 | |||||||
NDB | locus_tag | CELE_Y61A9LA.7 | |||||||
NCBI | gene | 190446 | |||||||
RefSeq | protein | NM_001313353.4 | |||||||
NM_001313354.4 | |||||||||
TrEMBL | UniProtAcc | A0A0K3AW52 | |||||||
A0A0K3ASI8 | |||||||||
UniProt_GCRP | UniProtAcc | A0A0K3ASI8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (30) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00042652 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00057914 | Caenorhabditis remanei | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00153393 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00134928 | Caenorhabditis japonica | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00107767 | Pristionchus pacificus | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
CBOVI.g303 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP21.g3145 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
CSP26.g20696 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g8840 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g5617 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP29.g5635 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP31.g26224 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP38.g16995 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
CSP40.g3733 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cni-Y61A9LA.7 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_06708.g36911 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_22701 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_019402 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
OTIPU.nOt.2.0.1.g07286 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
Sp34_50075120 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g14024 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including RIM; anterior arcade cell; coelomocyte; head mesodermal cell; and pharyngeal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including mianserin; Alovudine; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y61A9LA.7a | |||||||
Y61A9LA.7b | |||||||||
Corresponding_CDS_history | Y61A9LA.7:wp246 | ||||||||
Corresponding_transcript | Y61A9LA.7a.1 | ||||||||
Y61A9LA.7b.1 | |||||||||
Associated_feature | WBsf652580 | ||||||||
WBsf652581 | |||||||||
WBsf668907 | |||||||||
WBsf233590 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057830 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021205 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037661 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012615 | ||||||||
Expr1161267 | |||||||||
Expr2008130 | |||||||||
Expr2026369 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (122) | |||||||||
Map_info | Positive | Positive_clone | Y61A9LA | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -5.01746 | |||||||
Method | Gene |