WormBase Tree Display for Gene: WBGene00021976
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WBGene00021976 | SMap | S_parent | Sequence | Y58A7A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y58A7A.2 | |||||||
Molecular_name | Y58A7A.2 | ||||||||
Y58A7A.2.1 | |||||||||
CE53408 | |||||||||
Other_name | Y58A7A.d | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y58A7A.2 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | Y58A7A.2 | ||||||||
DB_info | Database | AceView | gene | 5F548 | |||||
WormQTL | gene | WBGene00021976 | |||||||
WormFlux | gene | WBGene00021976 | |||||||
NDB | locus_tag | CELE_Y58A7A.2 | |||||||
NCBI | gene | 190382 | |||||||
RefSeq | protein | NM_071958.2 | |||||||
TrEMBL | UniProtAcc | Q966A7 | |||||||
UniProt_GCRP | UniProtAcc | Q966A7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00030418 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
WormBase-Compara | |||||||||
WBGene00219516 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g14155 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; anterior hypodermis; arc ant V; and excretory system based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on RNA-seq and microarray studies. Is affected by twelve chemicals including methylmercury hydroxide; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y58A7A.2 | |||||||
Corresponding_CDS_history | Y58A7A.2:wp271 | ||||||||
Corresponding_transcript | Y58A7A.2.1 | ||||||||
Other_sequence | CJC12749_1 | ||||||||
CBC07274_1 | |||||||||
Associated_feature | WBsf652605 | ||||||||
WBsf233643 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057725 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1013424 | ||||||||
Expr1161153 | |||||||||
Expr2008087 | |||||||||
Expr2026325 | |||||||||
Drives_construct | WBCnstr00024380 | ||||||||
Construct_product | WBCnstr00024380 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (143) | |||||||||
Map_info | Positive | Positive_clone | Y58A7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -2.93634 | |||||||
Method | Gene |