WormBase Tree Display for Gene: WBGene00021939

WBGene00021939 SMap: S_parent: Sequence: Y55F3BR
  Identity: Version: 2
    Name: Sequence_name: Y55F3BR.2
      Molecular_name: Y55F3BR.2a
        Y55F3BR.2a.1
        CE48501
        Y55F3BR.2b
        CE49028
        Y55F3BR.2c
        CE48892
        Y55F3BR.2b.1
        Y55F3BR.2c.1
      Other_name: Y55F3BR.j Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        Y55F3BR.k Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y55F3BR.2 Accession_evidence: NDB BX284604
      Public_name: Y55F3BR.2
    DB_info: Database: AceView gene 4B627
        WormQTL gene WBGene00021939
        WormFlux gene WBGene00021939
        NDB locus_tag CELE_Y55F3BR.2
        Panther gene CAEEL|WormBase=WBGene00021939|UniProtKB=U4PMC3
          family PTHR46339
        NCBI gene 190314
        RefSeq protein NM_001307531.3
            NM_001307530.3
            NM_001307529.2
        TrEMBL UniProtAcc U4PRM5
            U4PMC3
            U4PER8
        UniProt_GCRP UniProtAcc U4PMC3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Nov 2004 10:50:54 WBPerson2970 Event: Acquires_merge: WBGene00021940
      Acquires_merge: WBGene00021940
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (358)
    RNASeq_FPKM (74)
    GO_annotation: 00126136
    Ortholog: WBGene00029129 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00029130 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00035593 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00035592 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00160840 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00119925 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00072826 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034648 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g8929 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14113 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15876 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2462 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2191 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g13678 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17955 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15194 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11772 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g1665 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13538 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00070.g3342 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_01093.g15670 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y55F3BR.2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20809 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01194.g19144 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05654 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20304 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_015746 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02783 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40012900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9583 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00104567 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00260593 Strongyloides ratti From_analysis: WormBase-Compara
      MGI:1095418 Mus musculus From_analysis: EnsEMBL-Compara
            PhylomeDB
            SonicParanoid
      RGD:735123 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoInspector
    Paralog (27)
    Structured_description: Automated_description: Predicted to enable serine-type endopeptidase inhibitor activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y55F3BR.2a
      Y55F3BR.2b
      Y55F3BR.2c
    Corresponding_CDS_history: Y55F3BR.2:wp131
      Y55F3BR.2:wp239
      Y55F3BR.2a:wp175
      Y55F3BR.2b:wp134
      Y55F3BR.2b:wp175
    Corresponding_transcript: Y55F3BR.2a.1
      Y55F3BR.2b.1
      Y55F3BR.2c.1
    Other_sequence: HG06516
      PP02559
      EL887863.1
    Associated_feature (17)
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1022218
      Expr1039650
      Expr1160979
      Expr2007992
      Expr2026234
    Microarray_results (35)
    Expression_cluster (140)
  Map_info: Positive: Positive_clone: Y55F3BR Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -23.2175
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene