WormBase Tree Display for Gene: WBGene00021930
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| WBGene00021930 | SMap | S_parent | Sequence | Y55F3AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y55F3AM.13 | |||||||
| Molecular_name | Y55F3AM.13 | ||||||||
| Y55F3AM.13.1 | |||||||||
| CE22542 | |||||||||
| Other_name | CELE_Y55F3AM.13 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y55F3AM.13 | ||||||||
| DB_info | Database | AceView | gene | 4B808 | |||||
| WormQTL | gene | WBGene00021930 | |||||||
| WormFlux | gene | WBGene00021930 | |||||||
| NDB | locus_tag | CELE_Y55F3AM.13 | |||||||
| NCBI | gene | 176925 | |||||||
| RefSeq | protein | NM_067630.6 | |||||||
| TrEMBL | UniProtAcc | Q9N362 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N362 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (52) | |||||||||
| Strain | WBStrain00036759 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Concise_description | Y55F3AM.13 encodes a protein with no obvious motifs or non-nematodehomologs, and with no obvious function in mass RNAi assays; Y55F3AM.13shares N-terminal UNC-13 binding, and thus may share at least somefunctions, with ERI-1, FBXA-153, and W04D2.6. | Paper_evidence | WBPaper00027120 | |||||
| WBPaper00028478 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 25 Oct 2007 00:00:00 | ||||||||
| Automated_description | Enriched in germ line; rectal epithelial cell; rectum; and somatic gonad precursor based on proteomic; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by six chemicals including Rifampin; allantoin; and Capsaicin based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y55F3AM.13 | |||||||
| Corresponding_transcript | Y55F3AM.13.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf651636 | ||||||||
| WBsf655497 | |||||||||
| WBsf229738 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057524 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021047 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021043 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033462 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016087 | ||||||||
| Expr1039642 | |||||||||
| Expr1160959 | |||||||||
| Expr2007979 | |||||||||
| Expr2026221 | |||||||||
| Drives_construct | WBCnstr00024400 | ||||||||
| Construct_product | WBCnstr00024400 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | Y55F3AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -22.3551 | |||||||
| Reference | WBPaper00027120 | ||||||||
| WBPaper00028478 | |||||||||
| WBPaper00041771 | |||||||||
| Method | Gene |
