WormBase Tree Display for Gene: WBGene00021906
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| WBGene00021906 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y55B1AR.2 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | Y55B1AM.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y55B1AM.b | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y55B1AM.c | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y55B1AR.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | Y55B1AR.2 | ||||||||
| DB_info | Database | AceView | gene | 3B206 | |||||
| WormQTL | gene | WBGene00021906 | |||||||
| WormFlux | gene | WBGene00021906 | |||||||
| NDB | locus_tag | CELE_Y55B1AR.2 | |||||||
| NCBI | gene | 175211 | |||||||
| RefSeq | protein | NM_001027744.5 | |||||||
| NM_001381693.2 | |||||||||
| NM_001381694.3 | |||||||||
| NM_001381692.1 | |||||||||
| TrEMBL | UniProtAcc | H2L0M2 | |||||||
| Q7YZG7 | |||||||||
| A0A679L8R8 | |||||||||
| A0A679L8V4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q7YZG7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (187) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpppaapa; ABprpppaapa; germ line; head mesodermal cell; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; hsf-1; and let-7 based on tiling array; proteomic; RNA-seq; and microarray studies. Is affected by nine chemicals including bisphenol S; Zidovudine; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y55B1AR.2a | |||||||
| Y55B1AR.2b | |||||||||
| Y55B1AR.2c | |||||||||
| Y55B1AR.2d | |||||||||
| Corresponding_CDS_history | Y55B1AR.2:wp100 | ||||||||
| Y55B1AR.2a:wp275 | |||||||||
| Y55B1AR.2b:wp206 | |||||||||
| Y55B1AR.2b:wp275 | |||||||||
| Corresponding_transcript | Y55B1AR.2a.1 | ||||||||
| Y55B1AR.2b.1 | |||||||||
| Y55B1AR.2c.1 | |||||||||
| Y55B1AR.2d.1 | |||||||||
| Other_sequence | CBC04412_1 | ||||||||
| Associated_feature | WBsf650799 | ||||||||
| WBsf650800 | |||||||||
| WBsf666526 | |||||||||
| WBsf666527 | |||||||||
| WBsf666528 | |||||||||
| WBsf991101 | |||||||||
| WBsf1014094 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021000 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021004 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057497 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037506 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011242 | ||||||||
| Expr1039623 | |||||||||
| Expr1160935 | |||||||||
| Expr2007967 | |||||||||
| Expr2026209 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction | WBInteraction000575301 | ||||||||
| WBInteraction000582338 | |||||||||
| Map_info | Positive | Positive_clone | Y55B1AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -26.6289 | |||||||
| Method | Gene |
