WormBase Tree Display for Gene: WBGene00021872
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| WBGene00021872 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-85 | Person_evidence | WBPerson261 | |||||
| WBPerson655 | |||||||||
| Sequence_name | Y54G2A.6 | ||||||||
| Molecular_name | Y54G2A.6a | ||||||||
| Y54G2A.6a.1 | |||||||||
| CE27494 | |||||||||
| Y54G2A.6b | |||||||||
| CE48649 | |||||||||
| Y54G2A.6b.1 | |||||||||
| Other_name | CELE_Y54G2A.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-85 | ||||||||
| DB_info | Database | AceView | gene | 4D619 | |||||
| WormQTL | gene | WBGene00021872 | |||||||
| WormFlux | gene | WBGene00021872 | |||||||
| NDB | locus_tag | CELE_Y54G2A.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021872|UniProtKB=Q95XX2 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 177068 | |||||||
| RefSeq | protein | NM_001380115.1 | |||||||
| NM_001383060.2 | |||||||||
| TrEMBL | UniProtAcc | Q95XX2 | |||||||
| U4PAM5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95XX2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-85 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (146) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (44) | |||||||||
| Structured_description | Automated_description | Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.6a | |||||||
| Y54G2A.6b | |||||||||
| Corresponding_transcript | Y54G2A.6a.1 | ||||||||
| Y54G2A.6b.1 | |||||||||
| Other_sequence (2) | |||||||||
| Associated_feature | WBsf645853 | ||||||||
| WBsf995798 | |||||||||
| WBsf1016970 | |||||||||
| WBsf228065 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057471 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00089356 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089367 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1001 | ||||||||
| Expr1970 | |||||||||
| Expr4722 | |||||||||
| Expr1027165 | |||||||||
| Expr1039606 | |||||||||
| Expr1160917 | |||||||||
| Expr2010216 | |||||||||
| Expr2028457 | |||||||||
| Drives_construct | WBCnstr00012199 | ||||||||
| WBCnstr00015895 | |||||||||
| WBCnstr00018658 | |||||||||
| Construct_product | WBCnstr00012199 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (321) | |||||||||
| Interaction | WBInteraction000517587 | ||||||||
| WBInteraction000517588 | |||||||||
| WBInteraction000517593 | |||||||||
| WBInteraction000517594 | |||||||||
| WBInteraction000525353 | |||||||||
| WBInteraction000525360 | |||||||||
| WBInteraction000549820 | |||||||||
| WBInteraction000585032 | |||||||||
| Map_info | Map | IV | Position | -6.72756 | Error | 0.000584 | |||
| Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005382 | ||||||||
| WBPaper00029438 | |||||||||
| WBPaper00031686 | |||||||||
| WBPaper00031865 | |||||||||
| WBPaper00032196 | |||||||||
| WBPaper00037541 | |||||||||
| WBPaper00045045 | |||||||||
| WBPaper00055320 | |||||||||
| WBPaper00058665 | |||||||||
| WBPaper00059481 | |||||||||
| WBPaper00060200 | |||||||||
| WBPaper00065681 | |||||||||
| WBPaper00065850 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
