WormBase Tree Display for Gene: WBGene00021872
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WBGene00021872 | SMap | S_parent | Sequence | Y54G2A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-85 | Person_evidence | WBPerson261 | |||||
WBPerson655 | |||||||||
Sequence_name | Y54G2A.6 | ||||||||
Molecular_name | Y54G2A.6a | ||||||||
Y54G2A.6a.1 | |||||||||
CE27494 | |||||||||
Y54G2A.6b | |||||||||
CE48649 | |||||||||
Y54G2A.6b.1 | |||||||||
Other_name | CELE_Y54G2A.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | clec-85 | ||||||||
DB_info | Database | AceView | gene | 4D619 | |||||
WormQTL | gene | WBGene00021872 | |||||||
WormFlux | gene | WBGene00021872 | |||||||
NDB | locus_tag | CELE_Y54G2A.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021872|UniProtKB=Q95XX2 | |||||||
family | PTHR23062 | ||||||||
NCBI | gene | 177068 | |||||||
RefSeq | protein | NM_001380115.1 | |||||||
NM_001383060.2 | |||||||||
TrEMBL | UniProtAcc | Q95XX2 | |||||||
U4PAM5 | |||||||||
UniProt_GCRP | UniProtAcc | Q95XX2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-85 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (146) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Paralog (44) | |||||||||
Structured_description | Automated_description | Expressed in intestine. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y54G2A.6a | |||||||
Y54G2A.6b | |||||||||
Corresponding_transcript | Y54G2A.6a.1 | ||||||||
Y54G2A.6b.1 | |||||||||
Other_sequence | CR08189 | ||||||||
CRC04511_1 | |||||||||
Associated_feature | WBsf645853 | ||||||||
WBsf995798 | |||||||||
WBsf1016970 | |||||||||
WBsf228065 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057471 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089356 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089367 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1001 | ||||||||
Expr1970 | |||||||||
Expr4722 | |||||||||
Expr1027165 | |||||||||
Expr1039606 | |||||||||
Expr1160917 | |||||||||
Expr2010216 | |||||||||
Expr2028457 | |||||||||
Drives_construct | WBCnstr00012199 | ||||||||
WBCnstr00015895 | |||||||||
WBCnstr00018658 | |||||||||
Construct_product | WBCnstr00012199 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (321) | |||||||||
Interaction | WBInteraction000517587 | ||||||||
WBInteraction000517588 | |||||||||
WBInteraction000517593 | |||||||||
WBInteraction000517594 | |||||||||
WBInteraction000525353 | |||||||||
WBInteraction000525360 | |||||||||
WBInteraction000549820 | |||||||||
WBInteraction000585032 | |||||||||
Map_info | Map | IV | Position | -6.72756 | Error | 0.000584 | |||
Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |