WormBase Tree Display for Gene: WBGene00021870
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| WBGene00021870 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | samt-1 | Paper_evidence | WBPaper00045324 | |||||
| Person_evidence | WBPerson11034 | ||||||||
| Sequence_name | Y54G2A.4 | ||||||||
| Molecular_name | Y54G2A.4 | ||||||||
| Y54G2A.4.1 | |||||||||
| CE31654 | |||||||||
| Other_name | Y54G2A.n | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y54G2A.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | samt-1 | ||||||||
| DB_info | Database | AceView | gene | 4D701 | |||||
| WormQTL | gene | WBGene00021870 | |||||||
| WormFlux | gene | WBGene00021870 | |||||||
| NDB | locus_tag | CELE_Y54G2A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021870|UniProtKB=Q9N3A9 | |||||||
| family | PTHR23516 | ||||||||
| NCBI | gene | 177075 | |||||||
| RefSeq | protein | NM_067873.9 | |||||||
| TREEFAM | TREEFAM_ID | TF328562 | |||||||
| TrEMBL | UniProtAcc | Q9N3A9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3A9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 27 Jun 2014 09:29:20 | WBPerson2970 | Name_change | CGC_name | samt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | samt | ||||||||
| Allele (83) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093635 | ||||||||
| 00126075 | |||||||||
| 00126076 | |||||||||
| 00126077 | |||||||||
| Ortholog (37) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable molybdate ion transmembrane transporter activity. Predicted to be involved in molybdate ion transport. Predicted to be located in plasma membrane. Is an ortholog of human MFSD5 (major facilitator superfamily domain containing 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.4 | |||||||
| Corresponding_CDS_history | Y54G2A.4:wp82 | ||||||||
| Corresponding_transcript | Y54G2A.4.1 | ||||||||
| Other_sequence (50) | |||||||||
| Associated_feature (21) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057469 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Chronogram672 | ||||||||
| Expr7057 | |||||||||
| Expr1011506 | |||||||||
| Expr1039604 | |||||||||
| Expr1160903 | |||||||||
| Expr2015590 | |||||||||
| Expr2033825 | |||||||||
| Drives_construct | WBCnstr00004077 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (206) | |||||||||
| Interaction | WBInteraction000581235 | ||||||||
| Map_info | Map | IV | Position | -6.69144 | |||||
| Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065080 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
