WormBase Tree Display for Gene: WBGene00021844
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| WBGene00021844 | SMap | S_parent | Sequence | Y54E10BR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sec-11 | |||||||
| Sequence_name | Y54E10BR.5 | ||||||||
| Molecular_name | Y54E10BR.5 | ||||||||
| Y54E10BR.5.1 | |||||||||
| CE22466 | |||||||||
| Other_name | Y54E10BR.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y54E10BR.5 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | sec-11 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Nov 2018 16:28:49 | WBPerson1983 | Name_change | CGC_name | sec-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sec | ||||||||
| Allele (43) | |||||||||
| Strain | WBStrain00049462 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Contained_in_operon | CEOP1924 | ||||||||
| Ortholog (44) | |||||||||
| Structured_description | Automated_description | Predicted to enable peptidase activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of signal peptidase complex. Is an ortholog of human SEC11C (SEC11 homolog C, signal peptidase complex subunit). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E10BR.5 | |||||||
| Corresponding_transcript | Y54E10BR.5.1 | ||||||||
| Other_sequence (71) | |||||||||
| Associated_feature | WBsf664006 | ||||||||
| WBsf983047 | |||||||||
| WBsf1009444 | |||||||||
| WBsf219090 | |||||||||
| Experimental_info | RNAi_result (30) | ||||||||
| Expr_pattern | Expr1013422 | ||||||||
| Expr1039588 | |||||||||
| Expr1160800 | |||||||||
| Expr2007895 | |||||||||
| Expr2026137 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Positive | Positive_clone | Y54E10BR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -4.71223 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058870 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
