WormBase Tree Display for Gene: WBGene00021843
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WBGene00021843 | SMap | S_parent | Sequence | Y54E10BR | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nobh | |||||
Allele (144) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (13) | ||||||
Contained_in_operon | CEOP1080 | |||||
Ortholog (35) | ||||||
Structured_description | Automated_description | Predicted to enable RNA endonuclease activity. Predicted to be involved in maturation of SSU-rRNA. Located in cytoplasm. Expressed in neurons. Is an ortholog of human NOB1 (NIN1 (RPN12) binding protein 1 homolog). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y54E10BR.4a | ||||
Y54E10BR.4b | ||||||
Corresponding_CDS_history | Y54E10BR.4a:wp50 | |||||
Y54E10BR.4b:wp50 | ||||||
Corresponding_transcript | Y54E10BR.4a.1 | |||||
Y54E10BR.4b.1 | ||||||
Other_sequence (28) | ||||||
Associated_feature | WBsf643127 | |||||
WBsf980981 | ||||||
WBsf983045 | ||||||
WBsf983046 | ||||||
WBsf1009443 | ||||||
WBsf217360 | ||||||
Experimental_info | RNAi_result (24) | |||||
Expr_pattern | Expr4584 | |||||
Expr9578 | ||||||
Expr1016632 | ||||||
Expr1039587 | ||||||
Expr1160799 | ||||||
Expr2007894 | ||||||
Expr2026136 | ||||||
Drives_construct | WBCnstr00012093 | |||||
Construct_product | WBCnstr00014143 | |||||
Microarray_results (24) | ||||||
Expression_cluster (129) | ||||||
Interaction (168) | ||||||
Map_info | Map | I | Position | -4.94196 | ||
Positive | Positive_clone | Y54E10BR | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00027740 | |||||
WBPaper00029254 | ||||||
WBPaper00034662 | ||||||
WBPaper00038444 | ||||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
WBPaper00064339 | ||||||
WBPaper00064934 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |