WormBase Tree Display for Gene: WBGene00021843
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WBGene00021843 | SMap | S_parent | Sequence | Y54E10BR | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nobh-1 | Person_evidence | WBPerson5956 | |||
Sequence_name | Y54E10BR.4 | ||||||
Molecular_name | Y54E10BR.4a | ||||||
Y54E10BR.4a.1 | |||||||
CE27481 | |||||||
Y54E10BR.4b | |||||||
CE54586 | |||||||
Y54E10BR.4b.1 | |||||||
Other_name | Y54E10BR.e | Curator_confirmed | WBPerson1983 | ||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
Y54E10BR.f | Curator_confirmed | WBPerson1983 | |||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
Y54E10BR.g | Curator_confirmed | WBPerson1983 | |||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
CELE_Y54E10BR.4 | Accession_evidence | NDB | BX284601 | ||||
Public_name | nobh-1 | ||||||
DB_info | Database | AceView | gene | 1D589 | |||
WormQTL | gene | WBGene00021843 | |||||
WormFlux | gene | WBGene00021843 | |||||
NDB | locus_tag | CELE_Y54E10BR.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00021843|UniProtKB=Q9N3D3 | |||||
family | PTHR12814 | ||||||
NCBI | gene | 171874 | |||||
RefSeq | protein | NM_001424977.1 | |||||
NM_058689.6 | |||||||
TrEMBL | UniProtAcc | Q9N3D3 | |||||
UniProt_GCRP | UniProtAcc | Q9N3D3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nobh | ||||||
Allele (144) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Contained_in_operon | CEOP1080 | ||||||
Ortholog (35) | |||||||
Structured_description | Automated_description | Predicted to enable RNA endonuclease activity. Predicted to be involved in maturation of SSU-rRNA. Located in cytoplasm. Expressed in neurons. Is an ortholog of human NOB1 (NIN1 (RPN12) binding protein 1 homolog). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y54E10BR.4a | |||||
Y54E10BR.4b | |||||||
Corresponding_CDS_history | Y54E10BR.4a:wp50 | ||||||
Y54E10BR.4b:wp50 | |||||||
Corresponding_transcript | Y54E10BR.4a.1 | ||||||
Y54E10BR.4b.1 | |||||||
Other_sequence (28) | |||||||
Associated_feature | WBsf643127 | ||||||
WBsf980981 | |||||||
WBsf983045 | |||||||
WBsf983046 | |||||||
WBsf1009443 | |||||||
WBsf217360 | |||||||
Experimental_info | RNAi_result (24) | ||||||
Expr_pattern | Expr4584 | ||||||
Expr9578 | |||||||
Expr1016632 | |||||||
Expr1039587 | |||||||
Expr1160799 | |||||||
Expr2007894 | |||||||
Expr2026136 | |||||||
Drives_construct | WBCnstr00012093 | ||||||
Construct_product | WBCnstr00014143 | ||||||
Microarray_results (24) | |||||||
Expression_cluster (129) | |||||||
Interaction (168) | |||||||
Map_info (3) | |||||||
Reference | WBPaper00027740 | ||||||
WBPaper00029254 | |||||||
WBPaper00034662 | |||||||
WBPaper00038444 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00064339 | |||||||
WBPaper00064934 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |