WormBase Tree Display for Gene: WBGene00021843
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| WBGene00021843 | SMap | S_parent | Sequence | Y54E10BR | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | nobh | |||||
| Allele (144) | ||||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation (13) | ||||||
| Contained_in_operon | CEOP1080 | |||||
| Ortholog (35) | ||||||
| Structured_description | Automated_description | Predicted to enable RNA endonuclease activity. Predicted to be involved in maturation of SSU-rRNA. Located in cytoplasm. Expressed in neurons. Is an ortholog of human NOB1 (NIN1 (RPN12) binding protein 1 homolog). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Y54E10BR.4a | ||||
| Y54E10BR.4b | ||||||
| Corresponding_CDS_history | Y54E10BR.4a:wp50 | |||||
| Y54E10BR.4b:wp50 | ||||||
| Corresponding_transcript | Y54E10BR.4a.1 | |||||
| Y54E10BR.4b.1 | ||||||
| Other_sequence (28) | ||||||
| Associated_feature (6) | ||||||
| Experimental_info | RNAi_result (24) | |||||
| Expr_pattern | Expr4584 | |||||
| Expr9578 | ||||||
| Expr1016632 | ||||||
| Expr1039587 | ||||||
| Expr1160799 | ||||||
| Expr2007894 | ||||||
| Expr2026136 | ||||||
| Drives_construct | WBCnstr00012093 | |||||
| Construct_product | WBCnstr00014143 | |||||
| Microarray_results (24) | ||||||
| Expression_cluster (129) | ||||||
| Interaction (168) | ||||||
| Map_info | Map | I | Position | -4.94196 | ||
| Positive | Positive_clone | Y54E10BR | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00027740 | |||||
| WBPaper00029254 | ||||||
| WBPaper00034662 | ||||||
| WBPaper00038444 | ||||||
| WBPaper00038491 | ||||||
| WBPaper00055090 | ||||||
| WBPaper00064339 | ||||||
| WBPaper00064934 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
