WormBase Tree Display for Gene: WBGene00021830
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WBGene00021830 | SMap | S_parent | Sequence | Y54E10A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y54E10A.10 | |||||||
Molecular_name | Y54E10A.10 | ||||||||
Y54E10A.10.1 | |||||||||
CE24439 | |||||||||
Other_name | CELE_Y54E10A.10 | Accession_evidence | NDB | BX284601 | |||||
Public_name | Y54E10A.10 | ||||||||
DB_info | Database | AceView | gene | 1D742 | |||||
WormQTL | gene | WBGene00021830 | |||||||
WormFlux | gene | WBGene00021830 | |||||||
NDB | locus_tag | CELE_Y54E10A.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021830|UniProtKB=Q9N3F0 | |||||||
family | PTHR12728 | ||||||||
NCBI | gene | 171892 | |||||||
RefSeq | protein | NM_058716.9 | |||||||
SwissProt | UniProtAcc | Q9N3F0 | |||||||
TREEFAM | TREEFAM_ID | TF314371 | |||||||
UniProt_GCRP | UniProtAcc | Q9N3F0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (69) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00093740 | ||||||||
00093741 | |||||||||
00093742 | |||||||||
00093743 | |||||||||
00093744 | |||||||||
00126034 | |||||||||
00126035 | |||||||||
00126036 | |||||||||
00126037 | |||||||||
Contained_in_operon | CEOP1916 | ||||||||
Ortholog (36) | |||||||||
Structured_description | Automated_description | Predicted to enable rRNA binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus. Is an ortholog of human RPF2 (ribosome production factor 2 homolog). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y54E10A.10 | |||||||
Corresponding_transcript | Y54E10A.10.1 | ||||||||
Other_sequence (63) | |||||||||
Associated_feature | WBsf983078 | ||||||||
WBsf983079 | |||||||||
WBsf219106 | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern | Expr1010513 | ||||||||
Expr1039577 | |||||||||
Expr1160775 | |||||||||
Expr2007885 | |||||||||
Expr2026126 | |||||||||
Microarray_results (16) | |||||||||
Expression_cluster (115) | |||||||||
Interaction (239) | |||||||||
Map_info | Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -4.47352 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00049828 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |