WormBase Tree Display for Gene: WBGene00021801
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| WBGene00021801 | SMap | S_parent | Sequence | Y53G8AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y53G8AL.3 | |||||||
| Molecular_name | Y53G8AL.3 | ||||||||
| Y53G8AL.3.1 | |||||||||
| CE54187 | |||||||||
| Other_name | CELE_Y53G8AL.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y53G8AL.3 | ||||||||
| DB_info | Database | AceView | gene | 3E340 | |||||
| WormQTL | gene | WBGene00021801 | |||||||
| WormFlux | gene | WBGene00021801 | |||||||
| NDB | locus_tag | CELE_Y53G8AL.3 | |||||||
| NCBI | gene | 190232 | |||||||
| RefSeq | protein | NM_001381803.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322956 | |||||||
| TrEMBL | UniProtAcc | Q95XY2 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XY2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00127198 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||
| WBGene00208373 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| FL83_14633 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g7222 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00009869 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016430 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-12; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by Atrazine and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53G8AL.3 | |||||||
| Corresponding_CDS_history | Y53G8AL.3:wp275 | ||||||||
| Corresponding_transcript | Y53G8AL.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00078600 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020967 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078613 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057304 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015329 | ||||||||
| Expr1160740 | |||||||||
| Expr2007865 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (45) | |||||||||
| Map_info | Positive | Positive_clone | Y53G8AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -7.32346 | |||||||
| Reference | WBPaper00063946 | ||||||||
| Method | Gene |
