WormBase Tree Display for Gene: WBGene00021748
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| WBGene00021748 | SMap | S_parent | Sequence | Y50D4C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y50D4C.3 | |||||||
| Molecular_name | Y50D4C.3a | ||||||||
| Y50D4C.3a.1 | |||||||||
| CE26547 | |||||||||
| Y50D4C.3b | |||||||||
| CE50693 | |||||||||
| Y50D4C.3b.1 | |||||||||
| Other_name | CELE_Y50D4C.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y50D4C.3 | ||||||||
| DB_info | Database | AceView | gene | 5B418 | |||||
| WormQTL | gene | WBGene00021748 | |||||||
| WormFlux | gene | WBGene00021748 | |||||||
| NDB | locus_tag | CELE_Y50D4C.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021748|UniProtKB=Q965Q9 | |||||||
| family | PTHR13681 | ||||||||
| NCBI | gene | 178599 | |||||||
| RefSeq | protein | NM_001313349.3 | |||||||
| NM_070957.4 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AW48 | |||||||
| Q965Q9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q965Q9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (152) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001474 | ||||||||
| 00001475 | |||||||||
| 00001476 | |||||||||
| 00125979 | |||||||||
| 00125980 | |||||||||
| 00125981 | |||||||||
| 00125982 | |||||||||
| Contained_in_operon | CEOP5559 | ||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00011576 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00019712 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA processing. Predicted to be located in nucleus. Is an ortholog of human TDRD3 (tudor domain containing 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y50D4C.3a | |||||||
| Y50D4C.3b | |||||||||
| Corresponding_transcript | Y50D4C.3a.1 | ||||||||
| Y50D4C.3b.1 | |||||||||
| Other_sequence | FE918390.1 | ||||||||
| MJ01503 | |||||||||
| CRC01100_1 | |||||||||
| CR11445 | |||||||||
| FG580386.1 | |||||||||
| CR01140 | |||||||||
| CRC00706_1 | |||||||||
| CR11444 | |||||||||
| CBC04952_1 | |||||||||
| FE918153.1 | |||||||||
| Associated_feature | WBsf233307 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057079 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066604 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021266 | ||||||||
| Expr1039531 | |||||||||
| Expr1160526 | |||||||||
| Expr2007749 | |||||||||
| Expr2025992 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction | WBInteraction000543520 | ||||||||
| WBInteraction000549028 | |||||||||
| WBInteraction000553274 | |||||||||
| WBInteraction000559626 | |||||||||
| WBInteraction000567552 | |||||||||
| WBInteraction000578256 | |||||||||
| WBInteraction000582194 | |||||||||
| WBInteraction000583531 | |||||||||
| Map_info | Positive | Positive_clone | Y50D4C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.9211 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Method | Gene |
