WormBase Tree Display for Gene: WBGene00021717
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| WBGene00021717 | SMap | S_parent | Sequence | Y49F6B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sdz-32 | Paper_evidence | WBPaper00024645 | |||||
| Person_evidence | WBPerson374 | ||||||||
| Sequence_name | Y49F6B.5 | ||||||||
| Molecular_name | Y49F6B.5 | ||||||||
| Y49F6B.5.1 | |||||||||
| CE22259 | |||||||||
| Other_name | CELE_Y49F6B.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sdz-32 | ||||||||
| DB_info | Database | AceView | gene | 2D765 | |||||
| WormQTL | gene | WBGene00021717 | |||||||
| WormFlux | gene | WBGene00021717 | |||||||
| NDB | locus_tag | CELE_Y49F6B.5 | |||||||
| NCBI | gene | 190080 | |||||||
| RefSeq | protein | NM_001377763.2 | |||||||
| TrEMBL | UniProtAcc | Q9N4U8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4U8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Aug 2005 17:08:06 | WBPerson2970 | Name_change | CGC_name | sdz-32 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sdz | ||||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Structured_description | Automated_description | Enriched in AVJ; body wall muscle cell; cholinergic neurons; and hypodermis based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and daf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by nine chemicals including methylmercuric chloride; Tunicamycin; and multi-walled carbon nanotube based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49F6B.5 | |||||||
| Corresponding_CDS_history | Y49F6B.5:wp274 | ||||||||
| Corresponding_transcript | Y49F6B.5.1 | ||||||||
| Associated_feature | WBsf644066 | ||||||||
| WBsf221015 | |||||||||
| WBsf221016 | |||||||||
| WBsf221017 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020797 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057040 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012403 | ||||||||
| Expr1039514 | |||||||||
| Expr1160484 | |||||||||
| Expr2015690 | |||||||||
| Expr2033923 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (61) | |||||||||
| Map_info | Map | II | Position | -6.29487 | Error | 0.009712 | |||
| Positive | Positive_clone | Y49F6B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038341 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
