WormBase Tree Display for Gene: WBGene00021716
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| WBGene00021716 | SMap | S_parent | Sequence | Y49F6B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-112 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y49F6B.3 | ||||||||
| Molecular_name | Y49F6B.3 | ||||||||
| Y49F6B.3.1 | |||||||||
| CE51613 | |||||||||
| Other_name | CELE_Y49F6B.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxb-112 | ||||||||
| DB_info | Database | AceView | gene | 2D781 | |||||
| WormQTL | gene | WBGene00021716 | |||||||
| WormFlux | gene | WBGene00021716 | |||||||
| NDB | locus_tag | CELE_Y49F6B.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021716|UniProtKB=Q9N4U4 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 190079 | |||||||
| RefSeq | protein | NM_062159.5 | |||||||
| TrEMBL | UniProtAcc | Q9N4U4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4U4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-112 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00149720 | Caenorhabditis brenneri | From_analysis | OMA | |||||
| WBGene00164610 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00066998 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| chrII_pilon.g4006 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (142) | |||||||||
| Structured_description | Automated_description | Enriched in ABplaapaap and ABpraapaap based on single-cell RNA-seq studies. Is affected by several genes including daf-2; glp-1; and eat-2 based on microarray; RNA-seq; and proteomic studies. Is affected by ten chemicals including Tunicamycin; stavudine; and Rifampin based on microarray; RNA-seq; and proteomic studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49F6B.3 | |||||||
| Corresponding_CDS_history | Y49F6B.3:wp253 | ||||||||
| Corresponding_transcript | Y49F6B.3.1 | ||||||||
| Associated_feature | WBsf644068 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00037302 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1023380 | ||||||||
| Expr1039513 | |||||||||
| Expr1160482 | |||||||||
| Expr2011606 | |||||||||
| Expr2029845 | |||||||||
| Microarray_results | 184670_at | ||||||||
| GPL14144_Y49F6B.3_528-587_0.938_1_A | |||||||||
| GPL19516_CGZ0047392 | |||||||||
| GPL21109_Y49F6B.3 | |||||||||
| GPL3518_CE25337 | |||||||||
| GPL8673_Y49F6B_3P00216 | |||||||||
| GPL8673_Y49F6B_3P00497 | |||||||||
| GPL9450_Y49F6B.3 | |||||||||
| cea2.i.17094 | |||||||||
| Expression_cluster (38) | |||||||||
| Map_info | Map | II | Position | -6.25223 | Error | 0.000735 | |||
| Positive | Positive_clone | Y49F6B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
