WormBase Tree Display for Gene: WBGene00021643
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| WBGene00021643 | SMap | S_parent | Sequence | Y47G6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ccep-290 | Paper_evidence | WBPaper00046970 | |||||
| Person_evidence | WBPerson7754 | ||||||||
| Sequence_name | Y47G6A.17 | ||||||||
| Molecular_name | Y47G6A.17 | ||||||||
| Y47G6A.17.1 | |||||||||
| CE40161 | |||||||||
| Other_name | cep-290 | Person_evidence | WBPerson2136 | ||||||
| CELE_Y47G6A.17 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | ccep-290 | ||||||||
| DB_info | Database | AceView | gene | 1E54 | |||||
| WormQTL | gene | WBGene00021643 | |||||||
| WormFlux | gene | WBGene00021643 | |||||||
| NDB | locus_tag | CELE_Y47G6A.17 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021643|UniProtKB=A2A266 | |||||||
| family | PTHR43939 | ||||||||
| NCBI | gene | 3565260 | |||||||
| RefSeq | protein | NM_058769.5 | |||||||
| TREEFAM | TREEFAM_ID | TF351161 | |||||||
| TrEMBL | UniProtAcc | A2A266 | |||||||
| UniProt_GCRP | UniProtAcc | A2A266 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Mar 2006 14:56:53 | WBPerson1867 | Event | Acquires_merge | WBGene00021642 | ||||
| 3 | 20 Jul 2015 09:35:37 | WBPerson2970 | Name_change | CGC_name | ccep-290 | ||||
| Other_name | cep-290 | ||||||||
| Acquires_merge | WBGene00021642 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ccep | ||||||||
| Allele (164) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (22) | |||||||||
| Structured_description | Automated_description | Involved in non-motile cilium assembly and protein localization to ciliary transition zone. Located in central cylinder. Expressed in amphid neurons and phasmid neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47G6A.17 | |||||||
| Corresponding_CDS_history | Y47G6A.17:wp124 | ||||||||
| Y47G6A.17:wp156 | |||||||||
| Corresponding_transcript | Y47G6A.17.1 | ||||||||
| Other_sequence | JI164362.1 | ||||||||
| Associated_feature | WBsf649024 | ||||||||
| WBsf983151 | |||||||||
| WBsf983152 | |||||||||
| WBsf983153 | |||||||||
| WBsf983154 | |||||||||
| WBsf1009510 | |||||||||
| WBsf1009511 | |||||||||
| WBsf219141 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056806 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056807 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004649 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004648 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12888 | ||||||||
| Expr1019216 | |||||||||
| Expr1039471 | |||||||||
| Expr1160260 | |||||||||
| Expr2009758 | |||||||||
| Expr2027998 | |||||||||
| Drives_construct | WBCnstr00020665 | ||||||||
| WBCnstr00022937 | |||||||||
| WBCnstr00024466 | |||||||||
| Construct_product | WBCnstr00020665 | ||||||||
| WBCnstr00022937 | |||||||||
| WBCnstr00024466 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (160) | |||||||||
| Map_info | Map | I | Position | -3.20635 | |||||
| Positive | Positive_clone | Y47G6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00046970 | ||||||||
| WBPaper00049372 | |||||||||
| WBPaper00054643 | |||||||||
| WBPaper00060708 | |||||||||
| WBPaper00062114 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
