WormBase Tree Display for Gene: WBGene00021623
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| WBGene00021623 | SMap | S_parent | Sequence | Y47D7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y47D7A.11 | |||||||
| Molecular_name | Y47D7A.11 | ||||||||
| Y47D7A.11.1 | |||||||||
| CE35807 | |||||||||
| Other_name | Y47D7A.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y47D7A.11 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y47D7A.11 | ||||||||
| DB_info | Database | AceView | gene | 5E906 | |||||
| WormQTL | gene | WBGene00021623 | |||||||
| WormFlux | gene | WBGene00021623 | |||||||
| NDB | locus_tag | CELE_Y47D7A.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021623|UniProtKB=Q9N3U4 | |||||||
| family | PTHR35575 | ||||||||
| NCBI | gene | 189987 | |||||||
| RefSeq | protein | NM_071823.5 | |||||||
| TrEMBL | UniProtAcc | Q9N3U4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3U4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00021616 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021619 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021620 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021621 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00235165 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021624 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; male-specific anatomical entity; and in male based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; rrf-3; and pmk-1 based on RNA-seq and microarray studies. Is affected by eleven chemicals including hydrogen sulfide; multi-walled carbon nanotube; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47D7A.11 | |||||||
| Corresponding_CDS_history | Y47D7A.11:wp109 | ||||||||
| Corresponding_transcript | Y47D7A.11.1 | ||||||||
| Other_sequence | FD517065.1 | ||||||||
| CJC09645_1 | |||||||||
| CJC10767_1 | |||||||||
| CSC01815_1 | |||||||||
| CBC06924_1 | |||||||||
| CJC05463_1 | |||||||||
| Associated_feature | WBsf233583 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00112694 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056778 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037173 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020199 | ||||||||
| Expr1160234 | |||||||||
| Drives_construct | WBCnstr00024473 | ||||||||
| Construct_product | WBCnstr00024473 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (68) | |||||||||
| Map_info | Positive | Positive_clone | Y47D7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -5.38623 | |||||||
| Method | Gene |
