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WormBase Tree Display for Gene: WBGene00021595

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Name Class

WBGene00021595SMapS_parentSequenceY46E12BL
IdentityVersion1
NameSequence_nameY46E12BL.2
Molecular_nameY46E12BL.2a
Y46E12BL.2a.1
CE27472
Y46E12BL.2a.2
Y46E12BL.2b
Other_nameCELE_Y46E12BL.2Accession_evidenceNDBBX284602
Public_nameY46E12BL.2
DB_infoDatabaseAceViewgene2P527
WormQTLgeneWBGene00021595
WormFluxgeneWBGene00021595
NDBlocus_tagCELE_Y46E12BL.2
PanthergeneCAEEL|WormBase=WBGene00021595|UniProtKB=Q965N8
familyPTHR21576
NCBIgene266878
RefSeqproteinNR_131432.1
NM_064918.8
TrEMBLUniProtAccQ965N8
UniProt_GCRPUniProtAccQ965N8
RNAcentralURSidURS00004C7A2D
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (235)
RNASeq_FPKM (74)
GO_annotation00090514
Ortholog (37)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of human RRP12 (ribosomal RNA processing 12 homolog).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY46E12BL.2a
Corresponding_transcriptY46E12BL.2b
Y46E12BL.2a.1
Y46E12BL.2a.2
Other_sequence (48)
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00117257Inferred_automaticallyRNAi_primary
WBRNAi00056663Inferred_automaticallyRNAi_primary
Expr_patternExpr1016590
Expr1039447
Expr1160135
Expr2007578
Expr2025814
Microarray_results (19)
Expression_clusterWBPaper00028451:Abundant_spermatogenesis_enriched
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00040560:hpl-2_embryo_downregulated
WBPaper00044037:eat-2_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_downregulated_HeatShock
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00047131:daf-2(e1370)_downregulated_N2-background
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049290:rsks-1(sv31)_downregulated
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:body-wall-muscle_nucleus_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051245:nucleus_specific
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055648:germline_expressed
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00057254:MWCNT_downregulated_mRNA
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00059605:MUT-16_interacting
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:M_cell
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:mcd-1_9177-bet-1
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00064716:paraquat_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065149:lin-52(n771)_downregulated
WBPaper00065258:anchor-cell_depleted
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065749:Heat-Shock_upregulated_N2
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00032948:FedUp
WBPaper00037611:GLD-2-associated
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00040858:eQTL_regulated_old
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00042274:tbx-2(bx59)_downregulated
WBPaper00047070:DAF-16-dependent_UV_response
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_allantoin_upregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
Interaction (138)
Map_infoPositivePositive_cloneY46E12BLInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII24.6344
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00061889
MethodGene