WormBase Tree Display for Gene: WBGene00021587

WBGene00021587 SMap: S_parent: Sequence: Y46C8AR
  Identity: Version: 2
    Name: CGC_name: clec-76 Person_evidence: WBPerson261
            WBPerson655
      Sequence_name: Y46C8AR.1
      Molecular_name: Y46C8AR.1
        Y46C8AR.1.1
        CE31650
      Other_name: Y46C8AR.a Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y46C8AR.1 Accession_evidence: NDB BX284604
      Public_name: clec-76
    DB_info: Database: AceView gene 4E733
        WormQTL gene WBGene00021587
        WormFlux gene WBGene00021587
        NDB locus_tag CELE_Y46C8AR.1
        Panther gene CAEEL|WormBase=WBGene00021587|UniProtKB=Q9N3V9
          family PTHR23062
        NCBI gene 189950
        RefSeq protein NM_068048.7
        TREEFAM TREEFAM_ID TF317818
        TrEMBL UniProtAcc Q9N3V9
        UniProt_GCRP UniProtAcc Q9N3V9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 28 Sep 2005 17:40:12 WBPerson2970 Name_change: CGC_name: clec-76
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (56)
    RNASeq_FPKM (74)
    Ortholog: WBGene00023668 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00025257 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00035982 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00035983 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00035984 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00040177 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00042755 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00068515 Caenorhabditis remanei From_analysis: OMA
      WBGene00056613 Caenorhabditis remanei From_analysis: OMA
      WBGene00079518 Caenorhabditis remanei From_analysis: OMA
      WBGene00079515 Caenorhabditis remanei From_analysis: OMA
      WBGene00067572 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00160672 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00157026 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00063662 Caenorhabditis remanei From_analysis: Inparanoid_8
      CBOVI.g11167 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9529 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP31.g19741 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15733 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4142 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00447.g10960 Caenorhabditis angaria From_analysis: WormBase-Compara
      chrIV_pilon.g10081 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (43)
    Structured_description: Automated_description: Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including Heme; tryptophan; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y46C8AR.1
    Corresponding_CDS_history: Y46C8AR.1:wp82
    Corresponding_transcript: Y46C8AR.1.1
    Associated_feature: WBsf996128
      WBsf228144
      WBsf228145
  Experimental_info: RNAi_result: WBRNAi00056654 Inferred_automatically: RNAi_primary
      WBRNAi00037121 Inferred_automatically: RNAi_primary
      WBRNAi00020644 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020914
      Expr1160123
      Expr2010208
      Expr2028449
    Microarray_results (17)
    Expression_cluster (192)
  Map_info: Map: IV Position: -1.25908 Error: 0.015919
    Positive: Positive_clone: Y46C8AR Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031002
    WBPaper00031686
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene