WormBase Tree Display for Gene: WBGene00021565
expand all nodes | collapse all nodes | view schema
| WBGene00021565 | SMap | S_parent | Sequence | Y45G12C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y45G12C.1 | |||||||
| Molecular_name | Y45G12C.1 | ||||||||
| Y45G12C.1.1 | |||||||||
| CE21936 | |||||||||
| Other_name | CELE_Y45G12C.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y45G12C.1 | ||||||||
| DB_info | Database | AceView | gene | 5D45 | |||||
| WormQTL | gene | WBGene00021565 | |||||||
| WormFlux | gene | WBGene00021565 | |||||||
| NDB | locus_tag | CELE_Y45G12C.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021565|UniProtKB=Q9N4X7 | |||||||
| family | PTHR31389 | ||||||||
| NCBI | gene | 189931 | |||||||
| RefSeq | protein | NM_071301.6 | |||||||
| TREEFAM | TREEFAM_ID | TF320732 | |||||||
| TrEMBL | UniProtAcc | Q9N4X7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4X7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (97) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (59) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including levamisole; Zidovudine; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1647) and Protein of unknown function DUF1647. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45G12C.1 | |||||||
| Corresponding_transcript | Y45G12C.1.1 | ||||||||
| Associated_feature | WBsf646707 | ||||||||
| WBsf661160 | |||||||||
| WBsf999506 | |||||||||
| WBsf231519 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056622 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020618 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037108 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014086 | ||||||||
| Expr1160086 | |||||||||
| Expr2007561 | |||||||||
| Expr2025797 | |||||||||
| Drives_construct | WBCnstr00024501 | ||||||||
| Construct_product | WBCnstr00024501 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Positive | Positive_clone | Y45G12C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -14.6795 | |||||||
| Reference | WBPaper00065080 | ||||||||
| Method | Gene |
