WormBase Tree Display for Gene: WBGene00021556
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| WBGene00021556 | SMap | S_parent | Sequence | Y45G5AM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y45G5AM.3 | |||||||
| Molecular_name | Y45G5AM.3a | ||||||||
| Y45G5AM.3a.1 | |||||||||
| CE48088 | |||||||||
| Y45G5AM.3a.2 | |||||||||
| Y45G5AM.3b | |||||||||
| Other_name | CELE_Y45G5AM.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y45G5AM.3 | ||||||||
| DB_info | Database | AceView | gene | 5E643 | |||||
| WormQTL | gene | WBGene00021556 | |||||||
| WormFlux | gene | WBGene00021556 | |||||||
| NDB | locus_tag | CELE_Y45G5AM.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021556|UniProtKB=Q9GUI8 | |||||||
| family | PTHR31006 | ||||||||
| NCBI | gene | 189928 | |||||||
| RefSeq | protein | NM_071758.3 | |||||||
| NR_138523.1 | |||||||||
| TrEMBL | UniProtAcc | Q9GUI8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9GUI8 | |||||||
| RNAcentral | URSid | URS0000A131DA | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (91) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (58) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; stavudine; and Sodium Chloride based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domain: F-box protein she-1-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (4) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056634 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016483 | ||||||||
| Expr1039434 | |||||||||
| Expr1160105 | |||||||||
| Expr2007564 | |||||||||
| Expr2025800 | |||||||||
| Microarray_results | 177152_at | ||||||||
| A_12_P118868 | |||||||||
| GPL13394_WBGene00021556 | |||||||||
| GPL13914_Y45G5AM.3 | |||||||||
| GPL14144_Y45G5AM.3_731-790_0.923_12_A | |||||||||
| GPL14144_Y45G5AM.3_831-890_0.913_20_B | |||||||||
| GPL19516_CGZ0046741 | |||||||||
| GPL21109_Y45G5AM.3 | |||||||||
| GPL3518_CE26405 | |||||||||
| GPL8304_CE_WBGene00021556_A | |||||||||
| GPL8304_CE_WBGene00021556_B | |||||||||
| GPL8673_Y45G5AM_3P00060 | |||||||||
| GPL8673_Y45G5AM_3P00961 | |||||||||
| GPL8673_Y45G5AM_3P01164 | |||||||||
| GPL9450_Y45G5AM.3 | |||||||||
| cea2.p.128803 | |||||||||
| Expression_cluster (165) | |||||||||
| Interaction | WBInteraction000576267 | ||||||||
| Map_info | Positive | Positive_clone | Y45G5AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -6.35212 | |||||||
| Reference | WBPaper00035429 | ||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
