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WormBase Tree Display for Gene: WBGene00021556

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Name Class

WBGene00021556SMapS_parentSequenceY45G5AM
IdentityVersion1
NameSequence_nameY45G5AM.3
Molecular_nameY45G5AM.3a
Y45G5AM.3a.1
CE48088
Y45G5AM.3a.2
Y45G5AM.3b
Other_nameCELE_Y45G5AM.3Accession_evidenceNDBBX284605
Public_nameY45G5AM.3
DB_infoDatabaseAceViewgene5E643
WormQTLgeneWBGene00021556
WormFluxgeneWBGene00021556
NDBlocus_tagCELE_Y45G5AM.3
PanthergeneCAEEL|WormBase=WBGene00021556|UniProtKB=Q9GUI8
familyPTHR31006
NCBIgene189928
RefSeqproteinNM_071758.3
NR_138523.1
TrEMBLUniProtAccQ9GUI8
UniProt_GCRPUniProtAccQ9GUI8
RNAcentralURSidURS0000A131DA
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (91)
RNASeq_FPKM (74)
OrthologWBGene00029108Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WBGene00052100Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00055175Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00064114Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00143126Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WBGene00064115Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00195082Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00163754Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00159265Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00153345Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00139934Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00153408Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00132557Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00140893Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00037679Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g11033Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12745Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12804Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12805Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g6229Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g8865Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g9368Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g1521Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g60Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16257Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16258Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16259Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16260Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16261Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16262Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11273Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g1379Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g1380Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g14170Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g22409Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6577Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1296Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g1297Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g1298Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g6383Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10615Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g17524Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g18572Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2552Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2554Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2556Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2558Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13053Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g13054Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g13958Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_00253.g7954Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12533Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03614.g30744Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18913Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009967Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g13933Caenorhabditis elegansFrom_analysisWormBase-Compara
nigoni.pc_2016.07.11_023.g28436Caenorhabditis nigoniFrom_analysisWormBase-Compara
WBGene00061651Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionAutomated_descriptionEnriched in amphid sheath cell and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; stavudine; and Sodium Chloride based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domain: F-box protein she-1-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY45G5AM.3a
Corresponding_transcriptY45G5AM.3b
Y45G5AM.3a.1
Y45G5AM.3a.2
Other_sequenceCBC00933_2
CGC00396_1
CBC00933_1
Associated_featureWBsf646745
WBsf231644
Experimental_infoRNAi_resultWBRNAi00056634Inferred_automaticallyRNAi_primary
Expr_patternExpr1016483
Expr1039434
Expr1160105
Expr2007564
Expr2025800
Microarray_results (16)
Expression_cluster (165)
InteractionWBInteraction000576267
Map_infoPositivePositive_cloneY45G5AMInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-6.35212
ReferenceWBPaper00035429
WBPaper00065331
MethodGene