WormBase Tree Display for Gene: WBGene00021539
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| WBGene00021539 | SMap | S_parent | Sequence | Y42H9AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y42H9AR.4 | |||||||
| Molecular_name | Y42H9AR.4 | ||||||||
| Y42H9AR.4.1 | |||||||||
| CE37682 | |||||||||
| Other_name | Y42H9AR.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y42H9AR.c | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y42H9AR.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y42H9AR.4 | ||||||||
| DB_info | Database | AceView | gene | 4I876 | |||||
| 4I870 | |||||||||
| WormQTL | gene | WBGene00021539 | |||||||
| WormFlux | gene | WBGene00021539 | |||||||
| NDB | locus_tag | CELE_Y42H9AR.4 | |||||||
| NCBI | gene | 3565368 | |||||||
| RefSeq | protein | NM_068952.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316356 | |||||||
| TrEMBL | UniProtAcc | Q9N3Y3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3Y3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4676 | ||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in ABplppaaaap; ABprppaaaap; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; daf-12; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by ten chemicals including D-glucose; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y42H9AR.4 | |||||||
| Corresponding_CDS_history | Y42H9AR.4:wp131 | ||||||||
| Corresponding_transcript | Y42H9AR.4.1 | ||||||||
| Other_sequence | CR11464 | ||||||||
| CJC04922_1 | |||||||||
| CGC01118_1 | |||||||||
| CR11463 | |||||||||
| CRC04532_1 | |||||||||
| Tcir_isotig11407 | |||||||||
| CBC01619_1 | |||||||||
| Associated_feature | WBsf651981 | ||||||||
| WBsf668082 | |||||||||
| WBsf668083 | |||||||||
| WBsf997138 | |||||||||
| WBsf1017802 | |||||||||
| WBsf230380 | |||||||||
| WBsf230381 | |||||||||
| WBsf230382 | |||||||||
| WBsf230383 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056446 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056445 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001760 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017620 | ||||||||
| Expr1039419 | |||||||||
| Expr1159921 | |||||||||
| Expr2007468 | |||||||||
| Expr2025705 | |||||||||
| Drives_construct | WBCnstr00024510 | ||||||||
| Construct_product | WBCnstr00024510 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction | WBInteraction000543584 | ||||||||
| Map_info | Positive | Positive_clone | Y42H9AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.60345 | |||||||
| Method | Gene |
