WormBase Tree Display for Gene: WBGene00021491

WBGene00021491 SMap: S_parent: Sequence: Y40B10A
  Identity: Version: 2
    Name: CGC_name: comt-4 Person_evidence: WBPerson260
      Sequence_name: Y40B10A.6
      Molecular_name: Y40B10A.6
        Y40B10A.6.1
        CE21794
      Other_name: Y40B10A.e Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y40B10A.6 Accession_evidence: NDB BX284605
      Public_name: comt-4
    DB_info: Database: AceView gene 5C522
        WormQTL gene WBGene00021491
        WormFlux gene WBGene00021491
        NDB locus_tag CELE_Y40B10A.6
        Panther gene CAEEL|WormBase=WBGene00021491|UniProtKB=Q965W4
          family PTHR10509
        NCBI gene 189789
        RefSeq protein NM_071157.2
        TREEFAM TREEFAM_ID TF312986
        TrEMBL UniProtAcc Q965W4
        UniProt_GCRP UniProtAcc Q965W4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Mar 2012 14:04:45 WBPerson2970 Name_change: CGC_name: comt-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: comt
    Allele: WBVar01908812
      WBVar01499528
      WBVar02122640
      WBVar01499167
      WBVar01499537
      WBVar02111418
      WBVar02123932
      WBVar00203786
      WBVar02111419
      WBVar01499740
      WBVar02104259
      WBVar02123411
      WBVar02117356
      WBVar02121038
      WBVar01840977
      WBVar02092902
      WBVar02092903
      WBVar02092904
      WBVar00271489
      WBVar02123275
      WBVar00451394
      WBVar01611932
      WBVar01611933
      WBVar01611934
      WBVar01611935
      WBVar01611936
      WBVar01611937
      WBVar01611938
      WBVar01611939
      WBVar01611940
      WBVar01611941
      WBVar02123477
      WBVar01611942
      WBVar01611943
      WBVar01611944
      WBVar02123848
      WBVar02121457
      WBVar01611945
      WBVar01611946
      WBVar01611947
      WBVar01611948
      WBVar01611949
      WBVar01985785
      WBVar01611950
      WBVar01611951
      WBVar01521419
      WBVar01611952
      WBVar01611953
      WBVar01611954
      WBVar01611955
      WBVar01611956
      WBVar01611957
      WBVar01611958
      WBVar01611959
      WBVar01611960
      WBVar01611961
      WBVar01611962
      WBVar01819286
      WBVar01819287
      WBVar00990753
      WBVar01611963
      WBVar01819288
      WBVar01611964
      WBVar00990754
      WBVar00990755
      WBVar01611965
      WBVar00990756
      WBVar01611966
      WBVar00990757
      WBVar00990758
      WBVar02124609
      WBVar02113199
      WBVar00990759
      WBVar00990760
      WBVar00990761
      WBVar00990762
      WBVar00990763
      WBVar01738039
      WBVar01738040
      WBVar01807518
      WBVar01499496
      WBVar01499316
      WBVar01500066
    Strain: WBStrain00054677
    RNASeq_FPKM (74)
    GO_annotation: 00090721
      00090722
      00090723
      00090724
      00125831
    Ortholog (58)
    Paralog: WBGene00012518 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00018741 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021487 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00021492 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable S-adenosylmethionine-dependent methyltransferase activity. Predicted to be involved in methylation. Is an ortholog of human COMTD1 (catechol-O-methyltransferase domain containing 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y40B10A.6
    Corresponding_transcript: Y40B10A.6.1
    Other_sequence: SS00758
      JI175513.1
      ASC25889_1
      AS08498
      AS10153
      Tcir_isotig08428
      SSC04249_1
    Associated_feature: WBsf652494
      WBsf999441
      WBsf233383
      WBsf233384
  Experimental_info: RNAi_result: WBRNAi00020439 Inferred_automatically: RNAi_primary
      WBRNAi00036967 Inferred_automatically: RNAi_primary
      WBRNAi00070074 Inferred_automatically: RNAi_primary
      WBRNAi00083991 Inferred_automatically: RNAi_primary
      WBRNAi00056307 Inferred_automatically: RNAi_primary
      WBRNAi00069438 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr16104
      Expr1021425
      Expr1159796
      Expr2010453
      Expr2028693
    Drives_construct: WBCnstr00024531
    Construct_product: WBCnstr00024531
    Microarray_results (17)
    Expression_cluster (259)
    Interaction (11)
  Map_info: Map: V Position: -16.1154
    Positive: Positive_clone: Y40B10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00042257
    WBPaper00053023
    WBPaper00055090
    WBPaper00062565
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene