WormBase Tree Display for Gene: WBGene00021471
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| WBGene00021471 | SMap | S_parent | Sequence | Y39G10AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y39G10AR.15 | |||||||
| Molecular_name | Y39G10AR.15 | ||||||||
| Y39G10AR.15.1 | |||||||||
| CE21756 | |||||||||
| Other_name | CELE_Y39G10AR.15 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y39G10AR.15 | ||||||||
| DB_info | Database | AceView | gene | 1C890 | |||||
| WormQTL | gene | WBGene00021471 | |||||||
| WormFlux | gene | WBGene00021471 | |||||||
| NDB | locus_tag | CELE_Y39G10AR.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021471|UniProtKB=Q95XQ7 | |||||||
| family | PTHR21720 | ||||||||
| NCBI | gene | 171794 | |||||||
| RefSeq | protein | NM_058562.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316274 | |||||||
| TrEMBL | UniProtAcc | Q95XQ7 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XQ7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Oct 2011 11:41:15 | WBPerson1867 | Event | Split_into | WBGene00219275 | ||||
| Split_into | WBGene00219275 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (62) | |||||||||
| Strain | WBStrain00037928 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00009182 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010920 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017441 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00194892 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00219275 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in ABalppppapa; ABpraaapapa; AVH; MC neuron; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including hydrogen sulfide; rotenone; and manganese chloride based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39G10AR.15 | |||||||
| Corresponding_CDS_history | Y39G10AR.15:wp228 | ||||||||
| Corresponding_transcript | Y39G10AR.15.1 | ||||||||
| Associated_feature | WBsf648964 | ||||||||
| WBsf663787 | |||||||||
| WBsf663946 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004550 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056268 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1159750 | ||||||||
| Expr2007395 | |||||||||
| Expr2025630 | |||||||||
| Drives_construct | WBCnstr00024541 | ||||||||
| Construct_product | WBCnstr00024541 | ||||||||
| Microarray_results | SMD_Y39G10A_243.B | ||||||||
| SMD_Y74C10A_154.C | |||||||||
| 176535_at | |||||||||
| Aff_Y39G10A_243.B | |||||||||
| GPL19516_CGZ0044979 | |||||||||
| GPL21109_Y39G10AR.15 | |||||||||
| GPL8673_Y39G10AR_15P00830 | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction | WBInteraction000218039 | ||||||||
| WBInteraction000544734 | |||||||||
| Map_info | Positive | Positive_clone | Y39G10AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -9.28463 | |||||||
| Reference | WBPaper00031387 | ||||||||
| Method | Gene |
