WormBase Tree Display for Gene: WBGene00021442

WBGene00021442 SMap: S_parent: Sequence: Y39A3CL
  Identity: Version: 1
    Name: Sequence_name: Y39A3CL.4
      Molecular_name: Y39A3CL.4a
        Y39A3CL.4a.1
        CE37425
        Y39A3CL.4b
        CE26985
        Y39A3CL.4c
        CE39826
        Y39A3CL.4b.1
        Y39A3CL.4c.1
      Other_name: Y46E12A.a Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y39A3CL.4 Accession_evidence: NDB BX284603
      Public_name: Y39A3CL.4
    DB_info: Database: AceView gene 3C862
        WormQTL gene WBGene00021442
        WormFlux gene WBGene00021442
        NDB locus_tag CELE_Y39A3CL.4
        Panther gene CAEEL|WormBase=WBGene00021442|UniProtKB=H2L0P9
          family PTHR23354
        NCBI gene 175325
        RefSeq protein NM_001047415.5
            NM_001404268.1
            NM_065055.6
        TREEFAM TREEFAM_ID TF315173
        TrEMBL UniProtAcc Q965X3
            A0A8S4QCF9
            G4SRU7
        UniProt_GCRP UniProtAcc A0A8S4QCF9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (177)
    RNASeq_FPKM (74)
    Ortholog (30)
    Paralog: WBGene00010671 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018700 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in excretory cell; germ line; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; sir-2.1; and sek-1 based on RNA-seq; microarray; and proteomic studies. Is affected by eight chemicals including aldicarb; Zidovudine; and paraquat based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: TLDc domain and TLD. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y39A3CL.4a
      Y39A3CL.4b
      Y39A3CL.4c
    Corresponding_CDS_history: Y39A3CL.4a:wp130
      Y39A3CL.4b:wp282
    Corresponding_transcript: Y39A3CL.4a.1
      Y39A3CL.4b.1
      Y39A3CL.4c.1
    Other_sequence (17)
    Associated_feature: WBsf650862
      WBsf991382
      WBsf991383
      WBsf226248
  Experimental_info: RNAi_result: WBRNAi00064122 Inferred_automatically: RNAi_primary
      WBRNAi00020017 Inferred_automatically: RNAi_primary
      WBRNAi00056146 Inferred_automatically: RNAi_primary
      WBRNAi00036901 Inferred_automatically: RNAi_primary
      WBRNAi00056147 Inferred_automatically: RNAi_primary
      WBRNAi00020363 Inferred_automatically: RNAi_primary
      WBRNAi00078610 Inferred_automatically: RNAi_primary
      WBRNAi00020362 Inferred_automatically: RNAi_primary
      WBRNAi00078598 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024382
      Expr1039367
      Expr1159657
      Expr2007358
      Expr2025592
    Microarray_results (30)
    Expression_cluster (93)
    Interaction: WBInteraction000577076
      WBInteraction000577228
      WBInteraction000581217
      WBInteraction000583701
      WBInteraction000584090
  Map_info: Positive: Positive_clone: Y39A3CL Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -16.818
  Reference: WBPaper00005736
  Method: Gene