WormBase Tree Display for Gene: WBGene00021436
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| WBGene00021436 | SMap | S_parent | Sequence | Y39A3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y39A3B.1 | |||||||
| Molecular_name | Y39A3B.1a | ||||||||
| Y39A3B.1a.1 | |||||||||
| CE35079 | |||||||||
| Y39A3B.1b | |||||||||
| CE21642 | |||||||||
| Y39A3B.1b.1 | |||||||||
| Other_name | CELE_Y39A3B.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y39A3B.1 | ||||||||
| DB_info | Database | AceView | gene | 3D97 | |||||
| WormQTL | gene | WBGene00021436 | |||||||
| WormFlux | gene | WBGene00021436 | |||||||
| NDB | locus_tag | CELE_Y39A3B.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021436|UniProtKB=Q9N516 | |||||||
| family | PTHR12147 | ||||||||
| NCBI | gene | 189721 | |||||||
| RefSeq | protein | NM_001404274.1 | |||||||
| NM_065089.2 | |||||||||
| TrEMBL | UniProtAcc | Q9N516 | |||||||
| A0A8S4QB55 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A8S4QB55 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (86) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095011 | ||||||||
| 00095012 | |||||||||
| 00095013 | |||||||||
| 00095014 | |||||||||
| 00125800 | |||||||||
| 00125801 | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00015206 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016631 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable metalloexopeptidase activity. Predicted to be involved in proteolysis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39A3B.1a | |||||||
| Y39A3B.1b | |||||||||
| Corresponding_CDS_history | Y39A3B.1:wp104 | ||||||||
| Corresponding_transcript | Y39A3B.1a.1 | ||||||||
| Y39A3B.1b.1 | |||||||||
| Other_sequence | JI482183.1 | ||||||||
| MH05998 | |||||||||
| Associated_feature | WBsf991441 | ||||||||
| WBsf1014345 | |||||||||
| WBsf224483 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036898 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006593 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020356 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056135 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089190 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014060 | ||||||||
| Expr1159648 | |||||||||
| Expr2007353 | |||||||||
| Expr2025588 | |||||||||
| Microarray_results | SMD_Y39A3B.1 | ||||||||
| 184897_at | |||||||||
| A_12_P104711 | |||||||||
| Aff_Y39A3B.I | |||||||||
| GPL13394_WBGene00021436 | |||||||||
| GPL13914_Y39A3B.1 | |||||||||
| GPL14144_Y39A3B.1_163-222_0.891_17_C | |||||||||
| GPL14144_Y39A3B.1_524-583_0.913_10_A | |||||||||
| GPL14144_Y39A3B.1_666-725_0.900_14_B | |||||||||
| GPL19516_CGZ0044777 | |||||||||
| GPL21109_Y39A3B.1 | |||||||||
| GPL3518_CE21642 | |||||||||
| GPL8304_CE_WBGene00021436_A | |||||||||
| GPL8304_CE_WBGene00021436_B | |||||||||
| GPL8673_Y39A3B_1P00450 | |||||||||
| GPL8673_Y39A3B_1P00902 | |||||||||
| GPL8673_Y39A3B_1P01035 | |||||||||
| GPL9450_Y39A3B.1 | |||||||||
| cea2.p.76491 | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction | WBInteraction000151368 | ||||||||
| WBInteraction000230218 | |||||||||
| WBInteraction000366859 | |||||||||
| WBInteraction000400685 | |||||||||
| WBInteraction000411167 | |||||||||
| WBInteraction000420212 | |||||||||
| Map_info | Positive | Positive_clone | Y39A3B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -15.6748 | |||||||
| Method | Gene |
