WormBase Tree Display for Gene: WBGene00021394
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| WBGene00021394 | SMap | S_parent | Sequence | Y38C1AA | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | Y38C1AA.1 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_Y38C1AA.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y38C1AA.1 | ||||||||
| DB_info | Database | AceView | gene | 4A969 | |||||
| WormQTL | gene | WBGene00021394 | |||||||
| WormFlux | gene | WBGene00021394 | |||||||
| NDB | locus_tag | CELE_Y38C1AA.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021394|UniProtKB=H2KZW8 | |||||||
| family | PTHR22753 | ||||||||
| NCBI | gene | 176836 | |||||||
| RefSeq | protein | NM_001356897.4 | |||||||
| NM_001356896.3 | |||||||||
| NM_171239.6 | |||||||||
| NM_001356898.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF312828 | |||||||
| TrEMBL | UniProtAcc | H2KZX0 | |||||||
| H2KZW7 | |||||||||
| Q8MXT2 | |||||||||
| H2KZW8 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZW8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Dec 2004 10:52:32 | WBPerson2970 | Name_change | CGC_name | prdx-6 | ||||
| 3 | 14 Jun 2006 08:40:26 | WBPerson2970 | Name_change | CGC_name | prdx-6 connection removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (126) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022610 | ||||||||
| 00022611 | |||||||||
| 00125759 | |||||||||
| Contained_in_operon | CEOP4636 | ||||||||
| CEOP4007 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable acyltransferase activity. Predicted to be located in membrane. Is an ortholog of human TMEM68 (transmembrane protein 68). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38C1AA.1a | |||||||
| Y38C1AA.1b | |||||||||
| Y38C1AA.1c | |||||||||
| Y38C1AA.1d | |||||||||
| Corresponding_CDS_history | Y38C1AA.1:wp82 | ||||||||
| Y38C1AA.1b:wp261 | |||||||||
| Y38C1AA.1c:wp261 | |||||||||
| Y38C1AA.1d:wp261 | |||||||||
| Corresponding_transcript | Y38C1AA.1a.1 | ||||||||
| Y38C1AA.1b.1 | |||||||||
| Y38C1AA.1c.1 | |||||||||
| Y38C1AA.1d.1 | |||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf645744 | ||||||||
| WBsf995096 | |||||||||
| WBsf995097 | |||||||||
| WBsf1016510 | |||||||||
| WBsf1016511 | |||||||||
| WBsf227813 | |||||||||
| WBsf227814 | |||||||||
| WBsf227815 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055983 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1023541 | ||||||||
| Expr1039345 | |||||||||
| Expr1159498 | |||||||||
| Expr2007292 | |||||||||
| Expr2025525 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (57) | |||||||||
| Interaction | WBInteraction000551553 | ||||||||
| Map_info | Positive | Positive_clone | Y38C1AA | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -26.8157 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | prdx-6 was previously incorrectly connected to this gene. It has now been connected to Y38C1AA.11 (WBgene00021401) | Curator_confirmed | WBPerson2970 | ||||||
| Method | Gene |
