WormBase Tree Display for Gene: WBGene00021389
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| WBGene00021389 | SMap | S_parent | Sequence | Y38A10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y38A10A.2 | |||||||
| Molecular_name | Y38A10A.2 | ||||||||
| Y38A10A.2.1 | |||||||||
| CE45075 | |||||||||
| Other_name | CELE_Y38A10A.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y38A10A.2 | ||||||||
| DB_info | Database | AceView | gene | 5G538 | |||||
| WormQTL | gene | WBGene00021389 | |||||||
| WormFlux | gene | WBGene00021389 | |||||||
| NDB | locus_tag | CELE_Y38A10A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021389|UniProtKB=Q9UAX6 | |||||||
| family | PTHR10974 | ||||||||
| NCBI | gene | 178994 | |||||||
| RefSeq | protein | NM_072169.7 | |||||||
| TREEFAM | TREEFAM_ID | TF312922 | |||||||
| TrEMBL | UniProtAcc | Q9UAX6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9UAX6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (74) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including arc ant V; excretory system; sensory neurons; somatic gonad precursor; and tail hypodermis based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-four chemicals including Ethanol; tryptophan; and methylmercury hydroxide based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF229) and Protein of unknown function DUF229. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38A10A.2 | |||||||
| Corresponding_CDS_history | Y38A10A.2:wp215 | ||||||||
| Corresponding_transcript | Y38A10A.2.1 | ||||||||
| Other_sequence | JI171092.1 | ||||||||
| Associated_feature | WBsf668656 | ||||||||
| WBsf668984 | |||||||||
| WBsf668985 | |||||||||
| WBsf668986 | |||||||||
| WBsf1000165 | |||||||||
| WBsf1000166 | |||||||||
| WBsf1019732 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020245 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055969 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001018 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014167 | ||||||||
| Expr1039342 | |||||||||
| Expr1159489 | |||||||||
| Expr2007287 | |||||||||
| Expr2025520 | |||||||||
| Drives_construct | WBCnstr00024563 | ||||||||
| Construct_product | WBCnstr00024563 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (224) | |||||||||
| Interaction (206) | |||||||||
| Map_info | Positive | Positive_clone | Y38A10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -0.381548 | |||||||
| Method | Gene |
