WormBase Tree Display for Gene: WBGene00021376
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| WBGene00021376 | SMap | S_parent | Sequence | Y37E11B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | blos-7 | Person_evidence | WBPerson451 | |||||
| Sequence_name | Y37E11B.3 | ||||||||
| Molecular_name | Y37E11B.3a | ||||||||
| Y37E11B.3a.1 | |||||||||
| CE19613 | |||||||||
| Y37E11B.3b | |||||||||
| CE48788 | |||||||||
| Y37E11B.3b.1 | |||||||||
| Other_name | CELE_Y37E11B.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | blos-7 | ||||||||
| DB_info | Database | AceView | gene | 4E346 | |||||
| WormQTL | gene | WBGene00021376 | |||||||
| WormFlux | gene | WBGene00021376 | |||||||
| NDB | locus_tag | CELE_Y37E11B.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021376|UniProtKB=Q9TYN4 | |||||||
| family | PTHR13440 | ||||||||
| NCBI | gene | 177119 | |||||||
| RefSeq | protein | NM_067976.5 | |||||||
| NM_001380153.1 | |||||||||
| TrEMBL | UniProtAcc | U4PN06 | |||||||
| Q9TYN4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9TYN4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Sep 2015 11:19:37 | WBPerson2970 | Name_change | CGC_name | blos-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | blos | ||||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097489 | ||||||||
| 00097490 | |||||||||
| Contained_in_operon | CEOP4100 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in lysosome localization. Predicted to be part of BORC complex. Is an ortholog of human BORCS6 (BLOC-1 related complex subunit 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y37E11B.3a | |||||||
| Y37E11B.3b | |||||||||
| Corresponding_transcript | Y37E11B.3a.1 | ||||||||
| Y37E11B.3b.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf229895 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036805 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055918 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062539 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018197 | ||||||||
| Expr1039336 | |||||||||
| Expr1159439 | |||||||||
| Expr2009637 | |||||||||
| Expr2027876 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction | WBInteraction000431211 | ||||||||
| WBInteraction000451685 | |||||||||
| WBInteraction000547248 | |||||||||
| Map_info | Map | IV | Position | -3.13584 | |||||
| Positive | Positive_clone | Y37E11B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00052655 | |||||||||
| WBPaper00052935 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064980 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
