WormBase Tree Display for Gene: WBGene00021329
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| WBGene00021329 | SMap | S_parent | Sequence | Y34D9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y34D9A.3 | |||||||
| Molecular_name (18) | |||||||||
| Other_name | Y34D9A.i | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y34D9A.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | Y34D9A.3 | ||||||||
| DB_info | Database | AceView | gene | 1B513 | |||||
| WormQTL | gene | WBGene00021329 | |||||||
| WormFlux | gene | WBGene00021329 | |||||||
| NDB | locus_tag | CELE_Y34D9A.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021329|UniProtKB=V6CKN0 | |||||||
| family | PTHR24150 | ||||||||
| NCBI | gene | 171684 | |||||||
| RefSeq | protein | NM_001306323.5 | |||||||
| NM_001380868.1 | |||||||||
| NM_001306326.3 | |||||||||
| NM_001380860.1 | |||||||||
| NM_001306328.4 | |||||||||
| NM_001306327.4 | |||||||||
| TrEMBL | UniProtAcc | V6CKN5 | |||||||
| V6CJH0 | |||||||||
| V6CLU7 | |||||||||
| V6CLZ2 | |||||||||
| V6CKN0 | |||||||||
| V6CLZ6 | |||||||||
| UniProt_GCRP | UniProtAcc | V6CKN0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (120) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00105320 | ||||||||
| Contained_in_operon | CEOP1908 | ||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplapaaaap; ABplapaaapa; ABplpaaaaa; ABprapaaaap; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including hsf-1; npr-1; and sek-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including rotenone; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y34D9A.3a | |||||||
| Y34D9A.3b | |||||||||
| Y34D9A.3c | |||||||||
| Y34D9A.3d | |||||||||
| Y34D9A.3e | |||||||||
| Y34D9A.3f | |||||||||
| Corresponding_CDS_history | Y34D9A.3:wp185 | ||||||||
| Y34D9A.3:wp240 | |||||||||
| Y34D9A.3a:wp126 | |||||||||
| Y34D9A.3a:wp142 | |||||||||
| Y34D9A.3b:wp126 | |||||||||
| Y34D9A.3b:wp142 | |||||||||
| Y34D9A.3c:wp126 | |||||||||
| Corresponding_transcript | Y34D9A.3a.1 | ||||||||
| Y34D9A.3b.1 | |||||||||
| Y34D9A.3c.1 | |||||||||
| Y34D9A.3d.1 | |||||||||
| Y34D9A.3e.1 | |||||||||
| Y34D9A.3f.1 | |||||||||
| Other_sequence | CRC01162_1 | ||||||||
| CR05851 | |||||||||
| Associated_feature | WBsf047634 | ||||||||
| WBsf643037 | |||||||||
| WBsf655878 | |||||||||
| WBsf655879 | |||||||||
| WBsf982649 | |||||||||
| WBsf982650 | |||||||||
| WBsf982651 | |||||||||
| WBsf1009179 | |||||||||
| WBsf1009180 | |||||||||
| WBsf217177 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00066105 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062057 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004577 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055830 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007303 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036768 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029190 | ||||||||
| Expr1039304 | |||||||||
| Expr1159358 | |||||||||
| Expr2007221 | |||||||||
| Expr2025453 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction | WBInteraction000547329 | ||||||||
| WBInteraction000553926 | |||||||||
| Map_info | Positive | Positive_clone | Y34D9A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -17.3414 | |||||||
| Reference | WBPaper00028984 | ||||||||
| Method | Gene |
