WormBase Tree Display for Gene: WBGene00021218
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| WBGene00021218 | SMap | S_parent | Sequence | Y19D10A | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | srd-76 | Person_evidence | WBPerson522 | ||||||
| Sequence_name | Y19D10A.3 | |||||||||
| Molecular_name | Y19D10A.3 | |||||||||
| Other_name | CELE_Y19D10A.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srd-76 | |||||||||
| DB_info | Database | AceView | gene | 5C877 | ||||||
| WormQTL | gene | WBGene00021218 | ||||||||
| NDB | locus_tag | CELE_Y19D10A.3 | ||||||||
| NCBI | gene | 13211924 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 03 Feb 2005 10:08:22 | WBPerson2970 | Event | Changed_class | CDS | Pseudogene | ||||
| Name_change | CGC_name | srd-76 | ||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srd | |||||||||
| Allele (32) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Structured_description | Automated_description | Enriched in neurons based on microarray studies. Is affected by several genes including daf-16; daf-2; and clk-1 based on microarray and RNA-seq studies. Is affected by allantoin based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y19D10A.3:wp138 | ||||||||
| Corresponding_pseudogene | Y19D10A.3 | |||||||||
| Experimental_info | Microarray_results | SMD_Y19D10A.O | ||||||||
| 176325_at | ||||||||||
| A_12_P118015 | ||||||||||
| GPL19516_CGZ0001632 | ||||||||||
| GPL19516_CGZ0043443 | ||||||||||
| GPL21109_C01B4.4 | ||||||||||
| GPL3518_CE21451 | ||||||||||
| Expression_cluster | WBPaper00045774:clk-1_upregulated | |||||||||
| WBPaper00048971:daf-16(mgDf50)_downregulated_L1 | ||||||||||
| WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult | ||||||||||
| WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult | ||||||||||
| WBPaper00055386:daf-2(e1370)_downregulated | ||||||||||
| WBPaper00030839:Larval_Pan_Neuronal | ||||||||||
| WBPaper00042236:flcn-1(ok975)_upregulated | ||||||||||
| WBPaper00048989:N2_allantoin_downregulated | ||||||||||
| Map_info | Map | V | Position | -14.8532 | ||||||
| Positive | Positive_clone | Y19D10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
