WormBase Tree Display for Gene: WBGene00021162
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| WBGene00021162 | SMap | S_parent | Sequence | Y5H2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y5H2A.1 | |||||||
| Molecular_name | Y5H2A.1 | ||||||||
| Y5H2A.1.1 | |||||||||
| CE21312 | |||||||||
| Other_name | Y5H2A.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y5H2A.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y5H2A.1 | ||||||||
| DB_info | Database | AceView | gene | 5C746 | |||||
| WormQTL | gene | WBGene00021162 | |||||||
| WormFlux | gene | WBGene00021162 | |||||||
| NDB | locus_tag | CELE_Y5H2A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021162|UniProtKB=Q9N4R3 | |||||||
| family | PTHR47921 | ||||||||
| NCBI | gene | 189359 | |||||||
| RefSeq | protein | NM_071222.3 | |||||||
| TREEFAM | TREEFAM_ID | TF320767 | |||||||
| TrEMBL | UniProtAcc | Q9N4R3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4R3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (55) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Enriched in NSM based on tiling array studies. Is affected by several genes including daf-16; eat-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Heme; methylmercuric chloride; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Caenorhabditis protein of unknown function, DUF282 and Protein of unknown function DUF282, Caenorhabditis species. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y5H2A.1 | |||||||
| Corresponding_transcript | Y5H2A.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057793 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021186 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013300 | ||||||||
| Expr1161223 | |||||||||
| Expr2008108 | |||||||||
| Expr2026348 | |||||||||
| Drives_construct | WBCnstr00024658 | ||||||||
| Construct_product | WBCnstr00024658 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (44) | |||||||||
| Map_info | Positive | Positive_clone | Y5H2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -15.0543 | |||||||
| Method | Gene |
