WormBase Tree Display for Gene: WBGene00021081
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WBGene00021081 | SMap | S_parent | Sequence | W08A12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pals-33 | Person_evidence | WBPerson260 | |||
Sequence_name | W08A12.4 | ||||||
Molecular_name | W08A12.4 | ||||||
WP:CE50562 | |||||||
CE50562 | |||||||
W08A12.4.1 | |||||||
Other_name | CELE_W08A12.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | pals-33 | ||||||
DB_info | Database | AceView | gene | 5E153 | |||
WormQTL | gene | WBGene00021081 | |||||
WormFlux | gene | WBGene00021081 | |||||
NDB | locus_tag | CELE_W08A12.4 | |||||
NCBI | gene | 189288 | |||||
RefSeq | mRNA | NM_071625.2 | |||||
protein | NP_504026.2 | ||||||
NM_071625.3 | |||||||
UniProt | UniProtAcc | O01622 | |||||
TrEMBL | UniProtAcc | O01622 | |||||
UniProt_GCRP | UniProtAcc | O01622 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pals | ||||||
Allele (57) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (12) | |||||||
Structured_description | Automated_description | Enriched in body wall muscle cell; excretory cell; intestine; neurons; and retrovesicular ganglion based on tiling array and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including tryptophan; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | W08A12.4 | |||||
Corresponding_CDS_history | W08A12.4:wp220 | ||||||
W08A12.4:wp247 | |||||||
Corresponding_transcript | W08A12.4.1 | ||||||
Other_sequence | GP00753 | ||||||
GPC00306_1 | |||||||
Associated_feature | WBsf999664 | ||||||
WBsf999665 | |||||||
Experimental_info | RNAi_result | WBRNAi00070145 | Inferred_automatically | RNAi_primary | |||
WBRNAi00019713 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054971 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012561 | ||||||
Expr1158506 | |||||||
Expr2014705 | |||||||
Expr2032941 | |||||||
Microarray_results (17) | |||||||
Expression_cluster (270) | |||||||
Interaction | WBInteraction000249412 | ||||||
WBInteraction000378060 | |||||||
WBInteraction000402846 | |||||||
WBInteraction000425647 | |||||||
WBInteraction000585375 | |||||||
Map_info (3) | |||||||
Reference | WBPaper00061319 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |