WormBase Tree Display for Gene: WBGene00021081
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| WBGene00021081 | SMap | S_parent | Sequence | W08A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pals-33 | Person_evidence | WBPerson260 | |||||
| Sequence_name | W08A12.4 | ||||||||
| Molecular_name | W08A12.4 | ||||||||
| WP:CE50562 | |||||||||
| CE50562 | |||||||||
| W08A12.4.1 | |||||||||
| Other_name | CELE_W08A12.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pals-33 | ||||||||
| DB_info | Database | AceView | gene | 5E153 | |||||
| WormQTL | gene | WBGene00021081 | |||||||
| WormFlux | gene | WBGene00021081 | |||||||
| NDB | locus_tag | CELE_W08A12.4 | |||||||
| NCBI | gene | 189288 | |||||||
| RefSeq | mRNA | NM_071625.2 | |||||||
| protein | NP_504026.2 | ||||||||
| NM_071625.3 | |||||||||
| UniProt | UniProtAcc | O01622 | |||||||
| TrEMBL | UniProtAcc | O01622 | |||||||
| UniProt_GCRP | UniProtAcc | O01622 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-33 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pals | ||||||||
| Allele | WBVar00206725 | ||||||||
| WBVar00206726 | |||||||||
| WBVar00206727 | |||||||||
| WBVar01499528 | |||||||||
| WBVar00206728 | |||||||||
| WBVar01616251 | |||||||||
| WBVar01616252 | |||||||||
| WBVar00206729 | |||||||||
| WBVar00206730 | |||||||||
| WBVar00206731 | |||||||||
| WBVar00206732 | |||||||||
| WBVar00206733 | |||||||||
| WBVar01499167 | |||||||||
| WBVar01972463 | |||||||||
| WBVar01972464 | |||||||||
| WBVar01000414 | |||||||||
| WBVar01499740 | |||||||||
| WBVar01000415 | |||||||||
| WBVar01000416 | |||||||||
| WBVar01000417 | |||||||||
| WBVar01000418 | |||||||||
| WBVar01000419 | |||||||||
| WBVar01000420 | |||||||||
| WBVar01000421 | |||||||||
| WBVar01000422 | |||||||||
| WBVar01000423 | |||||||||
| WBVar01000424 | |||||||||
| WBVar01000425 | |||||||||
| WBVar01000426 | |||||||||
| WBVar01000427 | |||||||||
| WBVar02079235 | |||||||||
| WBVar01000428 | |||||||||
| WBVar01000429 | |||||||||
| WBVar01000430 | |||||||||
| WBVar01000431 | |||||||||
| WBVar01000432 | |||||||||
| WBVar01000433 | |||||||||
| WBVar01500129 | |||||||||
| WBVar00265051 | |||||||||
| WBVar01499033 | |||||||||
| WBVar02152239 | |||||||||
| WBVar02076094 | |||||||||
| WBVar01986483 | |||||||||
| WBVar00454511 | |||||||||
| WBVar00454512 | |||||||||
| WBVar00454513 | |||||||||
| WBVar01499063 | |||||||||
| WBVar01483791 | |||||||||
| WBVar00584052 | |||||||||
| WBVar01498943 | |||||||||
| WBVar01498944 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar02090586 | |||||||||
| WBVar02123529 | |||||||||
| WBVar02151231 | |||||||||
| WBVar01500066 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (12) | |||||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; excretory cell; intestine; neurons; and retrovesicular ganglion based on tiling array and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including tryptophan; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W08A12.4 | |||||||
| Corresponding_CDS_history | W08A12.4:wp220 | ||||||||
| W08A12.4:wp247 | |||||||||
| Corresponding_transcript | W08A12.4.1 | ||||||||
| Other_sequence | GP00753 | ||||||||
| GPC00306_1 | |||||||||
| Associated_feature | WBsf999664 | ||||||||
| WBsf999665 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00070145 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054971 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012561 | ||||||||
| Expr1158506 | |||||||||
| Expr2014705 | |||||||||
| Expr2032941 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (270) | |||||||||
| Interaction | WBInteraction000249412 | ||||||||
| WBInteraction000378060 | |||||||||
| WBInteraction000402846 | |||||||||
| WBInteraction000425647 | |||||||||
| WBInteraction000585375 | |||||||||
| Map_info | Map | V | Position | -8.23619 | |||||
| Positive | Positive_clone | W08A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00061319 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
