WormBase Tree Display for Gene: WBGene00021074

WBGene00021074 SMap: S_parent: Sequence: W07E6
  Identity: Version: 2
    Name: CGC_name: gldi-1 Person_evidence: WBPerson6609
            WBPerson1816
      Sequence_name: W07E6.2
      Molecular_name: W07E6.2a
        W07E6.2a.1
        CE17294
        W07E6.2b
        CE51055
        W07E6.2b.1
      Other_name: CELE_W07E6.2 Accession_evidence: NDB BX284602
      Public_name: gldi-1
    DB_info: Database: AceView gene 2A772
        WormQTL gene WBGene00021074
        SignaLink protein WBGene00021074
        WormFlux gene WBGene00021074
        NDB locus_tag CELE_W07E6.2
        Panther gene CAEEL|WormBase=WBGene00021074|UniProtKB=Q9TYV3
          family PTHR19848
        NCBI gene 173439
        RefSeq protein NM_001316868.3
            NM_061344.5
        TrEMBL UniProtAcc Q9TYV3
            A0A0M9JJ65
        UniProt_GCRP UniProtAcc Q9TYV3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 05 May 2023 12:43:53 WBPerson51134 Name_change: CGC_name: gldi-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gldi
    Allele (59)
    RNASeq_FPKM (74)
    GO_annotation: 00001779
      00001780
      00097677
      00097678
      00097679
    Ortholog: WBGene00029232 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00161511 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00064193 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00130823 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00233947 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7750 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9320 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8434 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18282 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17549 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25735 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g912 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21373 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7997 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22608 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00290.g8598 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-W07E6.2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold605.g5662 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02260.g25674 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_15718 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_007978 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13588 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g7166 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20000600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3123 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00078430 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00078434 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00255520 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304260 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304269 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263885 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286107 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000668 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0021874 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050522-321 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:19889 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2429770 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308301 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: W07E6.2 encodes an ortholog of S. cerevisiae RSA4 that may suppress tumorous growth in the germ line by ensuring robust larval germline proliferation; like PRO-1, -2, and -3, W07E6.2 is probably required for ribosome biogenesis, suggesting a link between biogenesis in the distal sheath and control of cell division in the germ line. Paper_evidence: WBPaper00028280
            WBPaper00028933
          Curator_confirmed: WBPerson567
          Date_last_updated: 23 Apr 2008 00:00:00
      Automated_description: Predicted to be involved in Notch signaling pathway. Predicted to be located in nucleolus. Is an ortholog of human NLE1 (notchless homolog 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W07E6.2a
      W07E6.2b
    Corresponding_transcript: W07E6.2a.1
      W07E6.2b.1
    Other_sequence (55)
    Associated_feature: WBsf649825
      WBsf665327
      WBsf665328
      WBsf986418
      WBsf1011400
      WBsf222609
      WBsf222610
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr1021160
      Expr1039193
      Expr1158484
      Expr2006840
      Expr2025065
    Microarray_results (18)
    Expression_cluster (122)
    Interaction (147)
  Map_info: Map: II Position: -15.6026
    Positive: Positive_clone: W07E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028280
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene