WormBase Tree Display for Gene: WBGene00021047
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| WBGene00021047 | SMap | S_parent | Sequence | W05H7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | zfp-3 | Person_evidence | WBPerson71 | |||||
| Sequence_name | W05H7.4 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_W05H7.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | zfp-3 | ||||||||
| DB_info | Database | AceView | gene | XC60 | |||||
| WormQTL | gene | WBGene00021047 | |||||||
| WormFlux | gene | WBGene00021047 | |||||||
| NDB | locus_tag | CELE_W05H7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021047|UniProtKB=H2KZI6 | |||||||
| family | PTHR13119 | ||||||||
| NCBI | gene | 180479 | |||||||
| RefSeq | protein | NM_001380907.1 | |||||||
| NM_001029771.6 | |||||||||
| NM_171628.3 | |||||||||
| NM_171627.9 | |||||||||
| NM_001383527.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF352416 | |||||||
| TrEMBL | UniProtAcc | H2KZI6 | |||||||
| H2KZI4 | |||||||||
| H2KZI5 | |||||||||
| H2KZI3 | |||||||||
| O02174 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZI6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Jan 2008 15:11:50 | WBPerson2970 | Name_change | CGC_name | zfp-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zfp | ||||||||
| Allele (119) | |||||||||
| Strain | WBStrain00037745 | ||||||||
| WBStrain00051016 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022315 | ||||||||
| 00022316 | |||||||||
| 00022317 | |||||||||
| 00022318 | |||||||||
| 00026712 | |||||||||
| 00026713 | |||||||||
| 00026714 | |||||||||
| 00026715 | |||||||||
| 00026716 | |||||||||
| 00125526 | |||||||||
| Contained_in_operon | CEOPX016 | ||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00016799 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00020827 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W05H7.4a | |||||||
| W05H7.4b | |||||||||
| W05H7.4c | |||||||||
| W05H7.4d | |||||||||
| W05H7.4e | |||||||||
| Corresponding_CDS_history | W05H7.4a:wp105 | ||||||||
| W05H7.4b:wp105 | |||||||||
| W05H7.4c:wp141 | |||||||||
| Corresponding_transcript | W05H7.4a.1 | ||||||||
| W05H7.4b.1 | |||||||||
| W05H7.4c.1 | |||||||||
| W05H7.4d.1 | |||||||||
| W05H7.4e.1 | |||||||||
| Other_sequence | JI477929.1 | ||||||||
| Associated_feature (11) | |||||||||
| Transcription_factor | WBTranscriptionFactor001080 | ||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr9491 | ||||||||
| Expr1016159 | |||||||||
| Expr1039175 | |||||||||
| Expr1158394 | |||||||||
| Expr2018130 | |||||||||
| Expr2036267 | |||||||||
| Drives_construct | WBCnstr00024710 | ||||||||
| Construct_product | WBCnstr00014056 | ||||||||
| WBCnstr00024710 | |||||||||
| Microarray_results (60) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (148) | |||||||||
| Map_info | Map | X | Position | -18.118 | |||||
| Positive | Positive_clone | W05H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032289 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00059048 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
