WormBase Tree Display for Gene: WBGene00021032
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WBGene00021032 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-118 | Person_evidence | WBPerson2531 | |||||
Sequence_name | W04H10.4 | ||||||||
Molecular_name | W04H10.4a | ||||||||
W04H10.4a.1 | |||||||||
CE48269 | |||||||||
W04H10.4b | |||||||||
CE51155 | |||||||||
W04H10.4b.1 | |||||||||
Other_name | CELE_W04H10.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | clec-118 | ||||||||
DB_info | Database | AceView | gene | 2A900 | |||||
WormQTL | gene | WBGene00021032 | |||||||
WormFlux | gene | WBGene00021032 | |||||||
NDB | locus_tag | CELE_W04H10.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021032|UniProtKB=O44853 | |||||||
family | PTHR23124 | ||||||||
NCBI | gene | 189207 | |||||||
RefSeq | protein | NM_061370.4 | |||||||
NM_001316856.1 | |||||||||
TrEMBL | UniProtAcc | O44853 | |||||||
A0A0M7REL6 | |||||||||
UniProt_GCRP | UniProtAcc | O44853 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-118 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (63) | |||||||||
Strain | WBStrain00037858 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (94) | |||||||||
Paralog (126) | |||||||||
Structured_description | Automated_description | Enriched in coelomocyte and intestine based on tiling array and microarray studies. Is affected by several genes including daf-2; hsf-1; and rrf-3 based on tiling array; RNA-seq; and microarray studies. Is affected by six chemicals including Tunicamycin; multi-walled carbon nanotube; and resveratrol based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W04H10.4a | |||||||
W04H10.4b | |||||||||
Corresponding_CDS_history | W04H10.4:wp225 | ||||||||
W04H10.4:wp237 | |||||||||
Corresponding_transcript | W04H10.4a.1 | ||||||||
W04H10.4b.1 | |||||||||
Associated_feature | WBsf649830 | ||||||||
WBsf986452 | |||||||||
WBsf986453 | |||||||||
WBsf986454 | |||||||||
WBsf1011416 | |||||||||
Experimental_info | RNAi_result | WBRNAi00054802 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019609 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054308 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036288 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018127 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019330 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1158342 | ||||||||
Expr2010060 | |||||||||
Expr2028301 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (63) | |||||||||
Interaction (107) | |||||||||
Map_info | Map | II | Position | -15.5934 | Error | 0.00011 | |||
Positive | Positive_clone | W04H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |