WormBase Tree Display for Gene: WBGene00021021

WBGene00021021 SMap: S_parent: Sequence: W04B5
  Identity: Version: 2
    Name: CGC_name: mrpl-30 Person_evidence: WBPerson261
      Sequence_name: W04B5.4
      Molecular_name: W04B5.4
        W04B5.4.1
        CE20141
      Other_name: CELE_W04B5.4 Accession_evidence: NDB BX284603
      Public_name: mrpl-30
    DB_info: Database: AceView gene 3D496
        WormQTL gene WBGene00021021
        WormFlux gene WBGene00021021
        NDB locus_tag CELE_W04B5.4
        Panther gene CAEEL|WormBase=WBGene00021021|UniProtKB=Q9UA63
          family PTHR15892
        NCBI gene 175359
        RefSeq protein NM_065149.7
        TREEFAM TREEFAM_ID TF314611
        TrEMBL UniProtAcc Q9UA63
        UniProt_GCRP UniProtAcc Q9UA63
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2011 16:50:10 WBPerson2970 Name_change: CGC_name: mrpl-30
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrpl
    Allele (207)
    RNASeq_FPKM (74)
    GO_annotation: 00100643
      00100644
      00125509
      00125510
      00125511
    Contained_in_operon: CEOP3076
    Ortholog (21)
    Structured_description: Concise_description: W04B5.4 encodes a putative mitochondrial ribosomal protein L30 thatinhibits DHC-1 in vivo; W04B5.4 is orthologous to human MRPL3;W04B5.4(RNAi) suppresses the lethality of conditional dhc-1 mutations,as well as the spindle length and cytokinesis defects of dhc-1(or195), indicating that W04B5.4 negatively regulates dynein; W04B5.4 is requiredfor embryonic and larval development in mass RNAi assays. Paper_evidence: WBPaper00005654
            WBPaper00006395
            WBPaper00025054
            WBPaper00030897
          Curator_confirmed: WBPerson567
          Date_last_updated: 26 Aug 2007 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion. Predicted to be part of large ribosomal subunit. Is an ortholog of human MRPL30 (mitochondrial ribosomal protein L30). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W04B5.4
    Corresponding_transcript: W04B5.4.1
    Other_sequence (25)
    Associated_feature: WBsf991515
      WBsf1014404
      WBsf226273
      WBsf226274
  Experimental_info: RNAi_result: WBRNAi00054755 Inferred_automatically: RNAi_primary
      WBRNAi00007054 Inferred_automatically: RNAi_primary
      WBRNAi00026479 Inferred_automatically: RNAi_primary
      WBRNAi00068742 Inferred_automatically: RNAi_primary
      WBRNAi00007169 Inferred_automatically: RNAi_primary
      WBRNAi00036264 Inferred_automatically: RNAi_primary
      WBRNAi00068804 Inferred_automatically: RNAi_primary
      WBRNAi00009250 Inferred_automatically: RNAi_primary
      WBRNAi00054754 Inferred_automatically: RNAi_primary
      WBRNAi00109882 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028481
      Expr1039163
      Expr1158292
      Expr2013712
      Expr2031947
    Microarray_results (19)
    Expression_cluster (82)
    Interaction (29)
  Map_info: Map: III Position: -14.6073 Error: 0.019558
    Positive: Positive_clone: W04B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene