WormBase Tree Display for Gene: WBGene00020901
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| WBGene00020901 | SMap | S_parent | Sequence | T28F2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T28F2.2 | |||||||
| Molecular_name | T28F2.2a | ||||||||
| T28F2.2a.1 | |||||||||
| CE31075 | |||||||||
| T28F2.2b | |||||||||
| CE50200 | |||||||||
| T28F2.2a.2 | |||||||||
| T28F2.2b.1 | |||||||||
| Other_name | CELE_T28F2.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T28F2.2 | ||||||||
| DB_info | Database | AceView | gene | 1E207 | |||||
| WormQTL | gene | WBGene00020901 | |||||||
| WormFlux | gene | WBGene00020901 | |||||||
| NDB | locus_tag | CELE_T28F2.2 | |||||||
| Panther | gene | CAEEL|WormBase=T28F2.2b|UniProtKB=A0A0K3AQR5 | |||||||
| family | PTHR16231 | ||||||||
| NCBI | gene | 189048 | |||||||
| RefSeq | protein | NM_001381659.1 | |||||||
| NM_001381661.3 | |||||||||
| TrEMBL | UniProtAcc | O01659 | |||||||
| A0A0K3AQR5 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AQR5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| Strain | WBStrain00001859 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplapaaaap; ABplapaaap; ABprapaaaap; ABprapaaap; and intestine based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including sir-2.1; npr-1; and lin-35 based on quantitative PCR; microarray; and RNA-seq studies. Is affected by eight chemicals including rotenone; Alovudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: COMM domain-containing protein 4/6/7/8 and COMMD protein HN domain. Is an ortholog of human COMMD4 (COMM domain containing 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28F2.2a | |||||||
| T28F2.2b | |||||||||
| Corresponding_transcript | T28F2.2a.1 | ||||||||
| T28F2.2a.2 | |||||||||
| T28F2.2b.1 | |||||||||
| Other_sequence | CJC02633_1 | ||||||||
| Associated_feature | WBsf983183 | ||||||||
| WBsf1009528 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004338 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054426 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036092 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1553 | ||||||||
| Expr1014725 | |||||||||
| Expr1039105 | |||||||||
| Expr1157970 | |||||||||
| Expr2006627 | |||||||||
| Expr2024844 | |||||||||
| Drives_construct | WBCnstr00002651 | ||||||||
| WBCnstr00024799 | |||||||||
| Construct_product | WBCnstr00024799 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (76) | |||||||||
| Interaction | WBInteraction000182979 | ||||||||
| WBInteraction000382310 | |||||||||
| Map_info | Positive | Positive_clone | T28F2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -3.07656 | |||||||
| Reference | WBPaper00032196 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
