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WormBase Tree Display for Gene: WBGene00020891

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Name Class

WBGene00020891SMapS_parentSequenceT28C12
IdentityVersion2
NameCGC_namecest-24Person_evidenceWBPerson36909
WBPerson7188
Sequence_nameT28C12.4
Molecular_nameT28C12.4a
T28C12.4a.1
CE14343
T28C12.4b
CE14345
T28C12.4a.2
T28C12.4b.1
T28C12.4b.2
Other_nameCELE_T28C12.4Accession_evidenceNDBBX284605
Public_namecest-24
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 May 2019 14:10:26WBPerson1983Name_changeCGC_namecest-24
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcest
Allele (128)
RNASeq_FPKM (74)
GO_annotation00028487
00028488
00028489
00028490
OrthologWBGene00052137Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00038217Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00160350Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00159534Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00121920Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00190768Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00137251Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00051392Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00051532Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00130514Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00087936Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g373Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13195Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13261Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8693Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5454Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11290Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9303Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5085Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5086Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2540Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11736Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_08137.g21315Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09098.g21879Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g19823Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17553Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00057.g2844Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10758Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017905Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00314Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_50210200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14413Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g14414Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00112469Pristionchus pacificusFrom_analysisWormBase-Compara
FB:FBgn0015569Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
FB:FBgn0000326Drosophila melanogasterFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
Paralog (41)
Structured_descriptionConcise_descriptionT28C12.4 encodes a protein with visible similarity to human neuroligin 4 (mutated in autism), but also belongs to a large family of carboxylesterases that happen to include NLG-1; normally, T28C12.4 is expressed in hypodermal cells; transcription of T28C12.4 is immediately induced by exposure to ethanol, and with glr-2 is one of a few genes that may be specifically responsive to ethanol (as opposed to other stresses, which are expected to typically induce heat shock genes); the 5' flank of T28C12.4 contains a single ethanol- and stress-responsive element that is required in a T28C12.4::GFP transgene for transcriptional induction by ethanol.Paper_evidenceWBPaper00006465
Curator_confirmedWBPerson567
Date_last_updated11 Feb 2007 00:00:00
Automated_descriptionPredicted to enable carboxylic ester hydrolase activity. Expressed in hypodermis and seam cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoDisease_relevanceHuman liver carboxylesterases, CES1, CES2 and CES3 (orthologous to C. elegans T28C12.4), metabolize and detoxify drugs and toxins; CESs metabolize ester, thioester, carbamate and amide compounds to acid, alcohol and amine products; mutations in CES1 are associated with Carboxylesterase 1 deficiency.Homo sapiensAccession_evidenceOMIM114835
605278
605279
Curator_confirmedWBPerson324
Date_last_updated26 Jun 2012 00:00:00
Molecular_infoCorresponding_CDST28C12.4a
T28C12.4b
Corresponding_transcriptT28C12.4a.1
T28C12.4a.2
T28C12.4b.1
T28C12.4b.2
Other_sequence (41)
Associated_featureWBsf646872
WBsf646873
WBsf661326
WBsf661327
WBsf661328
WBsf661329
WBsf1000225
WBsf1000226
WBsf231867
WBsf231868
Experimental_infoRNAi_resultWBRNAi00054391Inferred_automaticallyRNAi_primary
WBRNAi00019384Inferred_automaticallyRNAi_primary
WBRNAi00089171Inferred_automaticallyRNAi_primary
WBRNAi00036074Inferred_automaticallyRNAi_primary
Expr_patternExpr2907
Expr1019072
Expr1039101
Expr1157938
Expr2006605
Expr2024821
Drives_constructWBCnstr00011018
WBCnstr00024806
Construct_productWBCnstr00024806
Microarray_results (25)
Expression_cluster (203)
Interaction (33)
Map_infoMapVPosition-0.18384
PositivePositive_cloneT28C12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00006465
WBPaper00010030
WBPaper00016665
WBPaper00032322
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene