WormBase Tree Display for Gene: WBGene00020889

WBGene00020889 SMap: S_parent: Sequence: T28C12
  Identity: Version: 1
    Name: Sequence_name: T28C12.2
      Molecular_name: T28C12.2
        T28C12.2.1
        CE14339
      Other_name: CELE_T28C12.2 Accession_evidence: NDB BX284605
      Public_name: T28C12.2
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (30)
    RNASeq_FPKM (74)
    GO_annotation: 00028491
      00028492
      00125411
      00125412
    Ortholog: WBGene00122959 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038219 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00052138 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038218 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00195044 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g293 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1148 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13260 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8692 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5453 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11291 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9304 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16231 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g19148 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g19150 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g19151 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g20014 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g2539 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11737 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00771.g14028 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g19824 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17554 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00057.g2845 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00057.g2846 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_017906 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50210300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14416 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00202963 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259070 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261726 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00262950 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0035767 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060818-29 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28486 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919425 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310132 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (16)
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in neuronal ceroid lipofuscinosis 7. Is an ortholog of human MFSD8 (major facilitator superfamily domain containing 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0110722 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:28486)
  Molecular_info: Corresponding_CDS: T28C12.2
    Corresponding_transcript: T28C12.2.1
    Other_sequence: JI225447.1
      CJC11956_1
      CBC15459_1
    Associated_feature: WBsf231870
  Experimental_info: RNAi_result: WBRNAi00054388 Inferred_automatically: RNAi_primary
      WBRNAi00036073 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022700
      Expr1157936
      Expr2006604
      Expr2024820
    Drives_construct: WBCnstr00024808
    Construct_product: WBCnstr00024808
    Microarray_results (19)
    Expression_cluster (141)
    Interaction (14)
  Map_info: Positive: Positive_clone: T28C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -0.182979
  Reference (2)
  Method: Gene