WormBase Tree Display for Gene: WBGene00020863
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WBGene00020863 | SMap | S_parent | Sequence | T27E4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T27E4.5 | |||||||
Molecular_name | T27E4.5 | ||||||||
T27E4.5.1 | |||||||||
CE35787 | |||||||||
Other_name | CELE_T27E4.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | T27E4.5 | ||||||||
DB_info | Database | AceView | gene | 5J548 | |||||
WormQTL | gene | WBGene00020863 | |||||||
WormFlux | gene | WBGene00020863 | |||||||
NDB | locus_tag | CELE_T27E4.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020863|UniProtKB=Q23053 | |||||||
family | PTHR36938 | ||||||||
NCBI | gene | 179282 | |||||||
RefSeq | protein | NM_072950.5 | |||||||
TREEFAM | TREEFAM_ID | TF317500 | |||||||
TrEMBL | UniProtAcc | Q23053 | |||||||
UniProt_GCRP | UniProtAcc | Q23053 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog | WBGene00011041 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00018824 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00020893 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00235308 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; MSaapaapa; arcade cell; and terminal bulb based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by nine chemicals including Tunicamycin; multi-walled carbon nanotube; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: WAP-type (Whey Acidic Protein) 'four-disulfide core'. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T27E4.5 | |||||||
Corresponding_CDS_history | T27E4.5:wp109 | ||||||||
Corresponding_transcript | T27E4.5.1 | ||||||||
Other_sequence | CRC06066_1 | ||||||||
Associated_feature | WBsf652884 | ||||||||
Experimental_info | RNAi_result | WBRNAi00019333 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054314 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036032 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015208 | ||||||||
Expr1157859 | |||||||||
Expr2006573 | |||||||||
Expr2024789 | |||||||||
Drives_construct | WBCnstr00024829 | ||||||||
Construct_product | WBCnstr00024829 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (79) | |||||||||
Interaction (17) | |||||||||
Map_info | Positive | Positive_clone | T27E4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 1.91814 | |||||||
Method | Gene |