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WormBase Tree Display for Gene: WBGene00020862

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Name Class

WBGene00020862SMapS_parentSequenceT27E4
IdentityVersion2
NameCGC_namefip-2Person_evidenceWBPerson168
Sequence_nameT27E4.4
Molecular_nameT27E4.4
T27E4.4.1
CE14253
Other_nameCELE_T27E4.4Accession_evidenceNDBBX284605
Public_namefip-2
DB_infoDatabaseAceViewgene5J547
WormQTLgeneWBGene00020862
WormFluxgeneWBGene00020862
NDBlocus_tagCELE_T27E4.4
NCBIgene179283
RefSeqproteinNM_072949.7
TrEMBLUniProtAccQ23052
UniProt_GCRPUniProtAccQ23052
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
203 Apr 2007 10:48:52WBPerson2970Name_changeCGC_namefip-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfip
Allele (15)
RNASeq_FPKM (74)
Ortholog (27)
Structured_descriptionAutomated_descriptionEnriched in arcade cell; neurons; and pharyngeal gland cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including hydrogen sulfide; Ethanol; and rotenone based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST27E4.4
Corresponding_transcriptT27E4.4.1
Other_sequence (18)
Associated_featureWBsf718367
WBsf718368
WBsf1000807
WBsf1000808
WBsf232204
Experimental_infoRNAi_resultWBRNAi00036031Inferred_automaticallyRNAi_primary
WBRNAi00054313Inferred_automaticallyRNAi_primary
Expr_patternExpr1021007
Expr1157858
Expr2011764
Expr2030001
Drives_constructWBCnstr00024830
Construct_productWBCnstr00024830
Microarray_results (18)
Expression_cluster (170)
Map_infoMapVPosition1.91735Error0.001301
PositivePositive_cloneT27E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene