WormBase Tree Display for Gene: WBGene00020853
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| WBGene00020853 | SMap | S_parent | Sequence | T27B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-137 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T27B7.7 | ||||||||
| Molecular_name | T27B7.7a | ||||||||
| T27B7.7a.1 | |||||||||
| CE47613 | |||||||||
| T27B7.7b | |||||||||
| Other_name | CELE_T27B7.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-137 | ||||||||
| DB_info | Database | AceView | gene | 5C761 | |||||
| WormQTL | gene | WBGene00020853 | |||||||
| WormFlux | gene | WBGene00020853 | |||||||
| NDB | locus_tag | CELE_T27B7.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020853|UniProtKB=O16666 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188978 | |||||||
| RefSeq | protein | NR_133580.1 | |||||||
| NM_071224.4 | |||||||||
| TrEMBL | UniProtAcc | O16666 | |||||||
| UniProt_GCRP | UniProtAcc | O16666 | |||||||
| RNAcentral | URSid | URS00008DEF16 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-137 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (64) | |||||||||
| Strain | WBStrain00036485 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Paralog (212) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaappppa; ABalapaappa; alimentary muscle; neurons; and rectal muscle based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T27B7.7a | |||||||
| Corresponding_CDS_history | T27B7.7:wp231 | ||||||||
| Corresponding_transcript | T27B7.7b | ||||||||
| T27B7.7a.1 | |||||||||
| Associated_feature | WBsf655082 | ||||||||
| WBsf999489 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019312 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054280 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022870 | ||||||||
| Expr1039090 | |||||||||
| Expr1157829 | |||||||||
| Expr2011472 | |||||||||
| Expr2029711 | |||||||||
| Drives_construct | WBCnstr00024836 | ||||||||
| Construct_product | WBCnstr00024836 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | V | Position | -15.0125 | Error | 0.004421 | |||
| Positive | Positive_clone | T27B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
