WormBase Tree Display for Gene: WBGene00020803

WBGene00020803 SMap: S_parent: Sequence: T25E4
  Identity: Version: 1
    Name: Sequence_name: T25E4.1
      Molecular_name: T25E4.1
        T25E4.1.1
        CE28493
      Other_name: CELE_T25E4.1 Accession_evidence: NDB BX284602
      Public_name: T25E4.1
    DB_info: Database: AceView gene 2F869
        WormQTL gene WBGene00020803
        WormFlux gene WBGene00020803
        NDB locus_tag CELE_T25E4.1
        NCBI gene 173943
        RefSeq protein NM_062679.5
        SwissProt UniProtAcc Q10014
        TREEFAM TREEFAM_ID TF316987
        UniProt_GCRP UniProtAcc Q10014
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    Ortholog: WBGene00097391 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00025495 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00057332 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00139672 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00150545 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130016 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g6916 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g5452 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12658 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23509 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14011 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13887 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7330 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22018 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25372 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7107 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00003.g263 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T25E4.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11371 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00331.g9547 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06092 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006069 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13596 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15293 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g8126 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20109800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4548 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266523 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00017073 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including anterior hypodermis; arcade cell; germ line; neurons; and pharynx based on microarray; proteomic; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-five chemicals including methylmercury hydroxide; 1-methylnicotinamide; and Tunicamycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF5346 and Family of unknown function (DUF5346). Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T25E4.1
    Corresponding_transcript: T25E4.1.1
    Other_sequence (12)
    Associated_feature: WBsf644212
      WBsf657601
      WBsf716687
      WBsf717670
      WBsf987910
      WBsf987911
      WBsf1012238
      WBsf1012239
      WBsf221302
  Experimental_info: RNAi_result: WBRNAi00035966 Inferred_automatically: RNAi_primary
      WBRNAi00054141 Inferred_automatically: RNAi_primary
      WBRNAi00002315 Inferred_automatically: RNAi_primary
      WBRNAi00019221 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021949
      Expr1039062
      Expr1157688
      Expr2006504
      Expr2024723
    Microarray_results (20)
    Expression_cluster (220)
    Interaction (77)
  Map_info: Positive: Positive_clone: T25E4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -1.10776
  Method: Gene