WormBase Tree Display for Gene: WBGene00020795
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| WBGene00020795 | SMap | S_parent | Sequence | T25D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T25D1.3 | |||||||
| Molecular_name | T25D1.3 | ||||||||
| T25D1.3.1 | |||||||||
| CE53541 | |||||||||
| T25D1.3.2 | |||||||||
| Other_name | CELE_T25D1.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T25D1.3 | ||||||||
| DB_info | Database | AceView | gene | XR119 | |||||
| WormQTL | gene | WBGene00020795 | |||||||
| WormFlux | gene | WBGene00020795 | |||||||
| NDB | locus_tag | CELE_T25D1.3 | |||||||
| NCBI | gene | 188891 | |||||||
| RefSeq | protein | NM_001375202.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322682 | |||||||
| TrEMBL | UniProtAcc | Q22777 | |||||||
| UniProt_GCRP | UniProtAcc | Q22777 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (116) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrV_pilon.g14963 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| chrX_pilon.g20438 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g20890 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00021728 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in AFD and neurons based on RNA-seq studies. Is affected by several genes including eat-2; hrde-1; and set-2 based on tiling array; microarray; and RNA-seq studies. Is affected by allantoin based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25D1.3 | |||||||
| Corresponding_CDS_history | T25D1.3:wp272 | ||||||||
| Corresponding_transcript | T25D1.3.1 | ||||||||
| T25D1.3.2 | |||||||||
| Associated_feature | WBsf663699 | ||||||||
| WBsf663700 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019206 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054125 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1039055 | ||||||||
| Expr1157667 | |||||||||
| Expr2006497 | |||||||||
| Expr2024716 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (37) | |||||||||
| Interaction | WBInteraction000332414 | ||||||||
| WBInteraction000408786 | |||||||||
| WBInteraction000434967 | |||||||||
| Map_info | Positive | Positive_clone | T25D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.0072 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
